RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SFTPA1Q8IWL2 248 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 IL17REQ8NFR9 667 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 SMCR8Q8TEV9 937 aaPredicted RBP4.78□□□□□ -1.64
NUP88-202ENST00000570937 CTHRC1Q96CG8 243 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 SNX22Q96L94 193 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 SNX18Q96RF0 628 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 MACROD1Q9BQ69 325 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 INO80BQ9C086 356 aaPredicted RBP4.78□□□□□ -1.64
NUP88-202ENST00000570937 HDAC9Q9UKV0 1011 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 USP22Q9UPT9 525 aa4.78□□□□□ -1.64
NUP88-202ENST00000570937 KDM6AO15550 1401 aaPredicted RBP4.78□□□□□ -1.64
NUP88-202ENST00000570937 DOT1LQ8TEK3 1739 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 SHANK3Q9BYB0 1731 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 RREB1Q92766 1687 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 TISP43B9A030 160 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 F8W8V4 182 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 AP4M1O00189 453 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 RAB27BO00194 218 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 RGS10O43665 173 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 PIAS2O75928 621 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 ANXA2P07355 339 aaKnown RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 CELA2AP08217 269 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 NHLRC4P0CG21 123 aaPredicted RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 TPH1P17752 444 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 RIPK4P57078 832 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 SUMO2P61956 95 aaKnown RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 TUBA4AP68366 448 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 CALD1Q05682 793 aaKnown RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 DAG1Q14118 895 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 RNASE12Q5GAN4 147 aaKnown RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 L1TD1Q5T7N2 865 aaKnown RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 PLAG1Q6DJT9 500 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 ZNF790Q6PG37 636 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 KIRREL2Q6UWL6 708 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 ZNF782Q6ZMW2 699 aaPredicted RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 DPY19L3Q6ZPD9 716 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 MCM10Q7L590 875 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 SIRT6Q8N6T7 355 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 CYP2W1Q8TAV3 490 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 DAZAP1Q96EP5 407 aaKnown RBP4.77□□□□□ -1.65
NUP88-202ENST00000570937 PLEKHF1Q96S99 279 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 SARGQ9BW04 601 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 SEMA4CQ9C0C4 833 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 BABAM1Q9NWV8 329 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 ITGB1BP2Q9UKP3 347 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 AMFRQ9UKV5 643 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 NUP188Q5SRE5 1749 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 CEMIPQ8WUJ3 1361 aa4.77□□□□□ -1.65
NUP88-202ENST00000570937 IL18RAPO95256 599 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 PDE8BO95263 885 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 FGAP02671 866 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 A1BGP04217 495 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 TMPOP42166 694 aaKnown RBP4.76□□□□□ -1.65
NUP88-202ENST00000570937 CRKLP46109 303 aaKnown RBP4.76□□□□□ -1.65
NUP88-202ENST00000570937 PGDP52209 483 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 GRM1Q13255 1194 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 SLC39A6Q13433 755 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 ITPK1Q13572 414 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 PRAMEF17Q5VTA0 474 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 MZT2AQ6P582 158 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 PTCHD4Q6ZW05 846 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 TERB1Q8NA31 727 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 ZDHHC12Q96GR4 267 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 ZBTB45Q96K62 511 aaPredicted RBP4.76□□□□□ -1.65
NUP88-202ENST00000570937 ZC3H10Q96K80 434 aaKnown RBP4.76□□□□□ -1.65
NUP88-202ENST00000570937 SELENOOQ9BVL4 669 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 APOL5Q9BWW9 433 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 CHMP4AQ9BY43 222 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 PNPLA8Q9NP80 782 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 GEMIN8Q9NWZ8 242 aaKnown RBP4.76□□□□□ -1.65
NUP88-202ENST00000570937 ZNF212Q9UDV6 495 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 VPS51Q9UID3 782 aa4.76□□□□□ -1.65
NUP88-202ENST00000570937 LY75O60449 1722 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 ITGB4P16144 1822 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 RHPN2P1A8MT19 583 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 PRRT4C9JH25 899 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 POC1B-GALNT4F8VUJ3 575 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 ADAMTS3O15072 1205 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 PQBP1O60828 265 aaKnown RBP4.75□□□□□ -1.65
NUP88-202ENST00000570937 PARP1P09874 1014 aaKnown RBP4.75□□□□□ -1.65
NUP88-202ENST00000570937 CYP19A1P11511 503 aaPredicted RBP4.75□□□□□ -1.65
NUP88-202ENST00000570937 SLC5A1P13866 664 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 HGFP14210 728 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 TRIM27P14373 513 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 FPR3P25089 353 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 PIK3CBP42338 1070 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 GATMP50440 423 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 RENBPP51606 427 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 CASP5P51878 434 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 PSG6Q00889 435 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 SRSF4Q08170 494 aaKnown RBP4.75□□□□□ -1.65
NUP88-202ENST00000570937 DCTN1Q14203 1278 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 TMEM119Q4V9L6 283 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 TMEM63BQ5T3F8 832 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 ZKSCAN2Q63HK3 967 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 CHSY1Q86X52 802 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 CCDC146Q8IYE0 955 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 GALNT4Q8N4A0 578 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 VGLL2Q8N8G2 317 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 CIPCQ9C0C6 399 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms