RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 FMNL3Q8IVF7 1028 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 UCMAQ8WVF2 138 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 TFAP2BQ92481 460 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 NDRG1Q92597 394 aaKnown RBP12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 NT5C1BQ96P26 610 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 CD93Q9NPY3 652 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 ITM2CQ9NQX7 267 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 ELOVL2Q9NXB9 296 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 CNTN6Q9UQ52 1028 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 GON4LQ3T8J9 2241 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 ATXN2Q99700 1313 aaKnown RBP12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 PPP1R3GB7ZBB8 358 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 RNF225M0QZC1 329 aaPredicted RBP12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 NCAM1P13591 858 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 CD19P15391 556 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 COPAP53621 1224 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 RING1Q06587 406 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 MORC3Q14149 939 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 ZNF234Q14588 700 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 STARD3Q14849 445 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 MEA1Q16626 185 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 ST3GAL2Q16842 350 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 MPP7Q5T2T1 576 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 ADGRF1Q5T601 910 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 PMF1Q6P1K2 205 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 TMEM270Q6UE05 265 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 SIX6OS1Q8N1H7 587 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 CADM4Q8NFZ8 388 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 UBA3Q8TBC4 463 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 DDI1Q8WTU0 396 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 RNF139Q8WU17 664 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 DNASE2BQ8WZ79 361 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 FOXJ1Q92949 421 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 AZIN2Q96A70 460 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 HSFY1Q96LI6 401 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 MKRN2Q9H000 416 aaKnown RBP12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 SLC6A17Q9H1V8 727 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 PRDM16Q9HAZ2 1276 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 DNAAF2Q9NVR5 837 aaKnown RBP12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 SFMBT1Q9UHJ3 866 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 CYP8B1Q9UNU6 501 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 CFAP47Q6ZTR5 3102 aa12.93□□□□□ -0.34
SCAMP2-212ENST00000569904 KCNA4P22459 653 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 CD6P30203 668 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 HLA-FP30511 346 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 ZNF252P-AS1Q0IIN9 211 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 CETN1Q12798 172 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 LRMPQ12912 555 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 BEND5Q7L4P6 421 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 PPM1KQ8N3J5 372 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 TRIML1Q8N9V2 468 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 WFIKKN2Q8TEU8 576 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 EDEM1Q92611 657 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 HSPA12BQ96MM6 686 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 TMEM245Q9H330 911 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 SUSD2Q9UGT4 822 aa12.92□□□□□ -0.34
SCAMP2-212ENST00000569904 BICDL2A1A5D9 508 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 KCNJ18B7U540 433 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 IRAK2O43187 625 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 GJB3O75712 270 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 FBXO21O94952 628 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 GNA14O95837 355 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 PRKCHP24723 683 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 OXTRP30559 389 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 GFPT1Q06210 699 aaPredicted RBP12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 SLC14A1Q13336 389 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 NNTQ13423 1086 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 CAMK2GQ13555 558 aaPredicted RBP12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 NUGGCQ68CJ6 796 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 TMPRSS6Q8IU80 811 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 NELFBQ8WX92 580 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 KAT5Q92993 513 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 PCED1AQ9H1Q7 454 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 PCDHB4Q9Y5E5 795 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 CEP295Q9C0D2 2601 aa12.91□□□□□ -0.34
SCAMP2-212ENST00000569904 MSI1O43347 362 aaKnown RBP12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 NDUFS2O75306 463 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 KRT37O76014 449 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 LTFP02788 710 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 CFIP05156 583 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 FYNP06241 537 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 SYPP08247 313 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 LCP1P13796 627 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 GPD2P43304 727 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 MAPK8P45983 427 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 TPMTP51580 245 aa12.9□□□□□ -0.34
SCAMP2-212ENST00000569904 KCNH2Q12809 1159 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms