RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 FBXW11Q9UKB1 542 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 SMG5Q9UPR3 1016 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 SCML2Q9UQR0 700 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 FAM169AQ9Y6X4 670 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 TRDMT1O14717 391 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 ANXA9O76027 345 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 INHBAP08476 426 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 CNTFP26441 200 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 IRX5P78411 483 aaPredicted RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 SKOR1P84550 965 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 ZNF252P-AS1Q0IIN9 211 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PDIA2Q13087 525 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 MFSD5Q6N075 450 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 SPATA17Q96L03 361 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 TSNARE1Q96NA8 513 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 QKIQ96PU8 341 aaKnown RBP eCLIP6.23□□□□□ -1.41
CYLD-216ENST00000569891 C11orf49Q9H6J7 331 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 EIF2B3Q9NR50 452 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 KLHL8Q9P2G9 620 aaPredicted RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 IPO11Q9UI26 975 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 XPO7Q9UIA9 1087 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 AAR2Q9Y312 384 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 SYNJ2BP-COX16A0A087WUM0 186 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 FAM170AA1A519 330 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 MAGEB16A2A368 324 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 MYBPHLA2RUH7 354 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 C5orf60A6NFR6 353 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PIK3R2O00459 728 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 MEFVO15553 781 aaPredicted RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 GCATO75600 419 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 KRT37O76014 449 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 FGF19O95750 216 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 CXCL10P02778 98 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 MYBL2P10244 700 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 RAG1P15918 1043 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 HDAC4P56524 1084 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 GPR17Q13304 367 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PPIGQ13427 754 aaKnown RBP eCLIP6.23□□□□□ -1.41
CYLD-216ENST00000569891 MGAT5BQ3V5L5 792 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PABPC1LQ4VXU2 614 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 VARS2Q5ST30 1063 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 AADACL2Q6P093 401 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 ZC3H18Q86VM9 953 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 FAM131BQ86XD5 332 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PLD5Q8N7P1 536 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 HTR3CQ8WXA8 447 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 CSPG4P5Q96PW8 444 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 SMC6Q96SB8 1091 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 SELENOSQ9BQE4 189 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 TMEM121Q9BTD3 319 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 CDC42EP4Q9H3Q1 356 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 RAB6BQ9NRW1 208 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 BFARQ9NZS9 450 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 COX16Q9P0S2 106 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 ATP11BQ9Y2G3 1177 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 TIMM13Q9Y5L4 95 aaPredicted RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 COL4A4P53420 1690 aaPredicted RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 ASH1LQ9NR48 2969 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 A0A0A0MRY4 1105 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 ARHGAP42A6NI28 874 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 KRT38O76015 456 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 USP17L7P0C7H9 530 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 KRT15P19012 456 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 KLRC2P26717 231 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PARP6Q2NL67 630 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 NAPEPLDQ6IQ20 393 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 RFX8Q6ZV50 586 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 CCDC13Q8IYE1 715 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 CMTR2Q8IYT2 770 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 ATPAF2Q8N5M1 289 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 RTP4Q96DX8 246 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 SPATA13Q96N96 652 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 SMOC2Q9H3U7 446 aa6.23□□□□□ -1.41
CYLD-216ENST00000569891 PSMC3IPQ9P2W1 217 aaPredicted RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 HBS1LQ9Y450 684 aaKnown RBP6.23□□□□□ -1.41
CYLD-216ENST00000569891 PDCD11Q14690 1871 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 EBAG9O00559 213 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 NRP1O14786 923 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ALOX15BO15296 676 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 MGEA5O60502 916 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 SLC11A2P49281 568 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 GLUD2P49448 558 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 CXCR3P49682 368 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 OXCT1P55809 520 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 MRPS25P82663 173 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 SLC29A2Q14542 456 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 PAFAH1B3Q15102 231 aaKnown RBP6.22□□□□□ -1.41
CYLD-216ENST00000569891 BBS9Q3SYG4 887 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 LLGL2Q6P1M3 1020 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ZBED8Q8IZ13 594 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 FAM71DQ8N9W8 422 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 GSTCDQ8NEC7 633 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 SGSM3Q96HU1 749 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 SMOQ99835 787 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 MIOSQ9NXC5 875 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 TRPM5Q9NZQ8 1165 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 ZMYM5Q9UJ78 669 aa6.22□□□□□ -1.41
CYLD-216ENST00000569891 NOVA2Q9UNW9 492 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms