RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 GABBR2O75899 941 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 C6orf222P0C671 652 aaPredicted RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 FGFR1P11362 822 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 EZRP15311 586 aaKnown RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 GCKP35557 465 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 DAOAP59103 153 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ATP11AP98196 1134 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 WASHC5Q12768 1159 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 SLC1A5Q15758 541 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ANKRD20A2Q5SQ80 823 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ANKRD20A1Q5TYW2 823 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ANKRD20A3Q5VUR7 823 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 C1orf228Q6PIY5 440 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ZNF534Q76KX8 674 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ANKMY2Q8IV38 441 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 GDAP1Q8TB36 358 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 MGARPQ8TDB4 240 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 SREK1Q8WXA9 508 aaKnown RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ATP2A3Q93084 1043 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 KLHL29Q96CT2 875 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 CEP295NLQ96MC4 621 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 PWWP2AQ96N64 755 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 FAM118BQ9BPY3 351 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TSSK1BQ9BXA7 367 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 SENP6Q9GZR1 1112 aaPredicted RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 MYLK2Q9H1R3 596 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 NXF3Q9H4D5 531 aaKnown RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 RABEP2Q9H5N1 569 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 DHX35Q9H5Z1 703 aaKnown RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TRPC7Q9HCX4 862 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ARHGEF4Q9NR80 690 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ABCF3Q9NUQ8 709 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 DTLQ9NZJ0 730 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TBK1Q9UHD2 729 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 CHMP2BQ9UQN3 213 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 SCN10AQ9Y5Y9 1956 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TMEM189-UBE2V1I3L0A0 370 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 CACNG3O60359 315 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 CCDC22O60826 627 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 MPOP05164 745 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 MYL3P08590 195 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 PTPN4P29074 926 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 SSTR1P30872 391 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 RGS7P49802 495 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TNK2Q07912 1038 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 GRIK3Q13003 919 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 LRRC14Q15048 493 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TAF5Q15542 800 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 MFSD14CQ5VZR4 134 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 SCYL2Q6P3W7 929 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 UNC5AQ6ZN44 842 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 FAM228AQ86W67 206 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 CDR2LQ86X02 465 aaPredicted RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 APLFQ8IW19 511 aaPredicted RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 ARHGAP18Q8N392 663 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TCP10LQ8TDR4 215 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 HHIPL1Q96JK4 782 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 DNAJC17Q9NVM6 304 aaKnown RBP8.12□□□□□ -1.11
LINC00559-201ENST00000569476 FBXW11Q9UKB1 542 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 GRID1Q9ULK0 1009 aa8.12□□□□□ -1.11
LINC00559-201ENST00000569476 TCRBV7S3A2A0A539 114 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 WASH4PA8MWX3 477 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 M0QZQ0 153 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 EEF2KO00418 725 aaKnown RBP8.11□□□□□ -1.11
LINC00559-201ENST00000569476 SRGAP2BP0DMP2 458 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 GRK2P25098 689 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 CXCR3P49682 368 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 MGAT5Q09328 741 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 DSC3Q14574 896 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 CCDC153Q494R4 210 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 FAM171BQ6P995 826 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 KCNT2Q6UVM3 1135 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 NPNTQ6UXI9 565 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 OTOAQ7RTW8 1153 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 PIGZQ86VD9 579 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 OSTM1Q86WC4 334 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 DEFB106AQ8N104 65 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 SLC2A14Q8TDB8 520 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 DNAJB3Q8WWF6 145 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
LINC00559-201ENST00000569476 EPAS1Q99814 870 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 SYT15Q9BQS2 421 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 GJD2Q9UKL4 321 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 PLXNA3P51805 1871 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 CREB1P16220 341 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 PRDX6P30041 224 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 DEUP1Q05D60 604 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 GALNT2Q10471 571 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 PRPSAP1Q14558 356 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 SLC14A2Q15849 920 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 OTUD1Q5VV17 481 aaPredicted RBP8.11□□□□□ -1.11
LINC00559-201ENST00000569476 DCLRE1AQ6PJP8 1040 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 CLEC20AQ6ZU45 233 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 RFX8Q6ZV50 586 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 FAM35AQ86V20 835 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 SERINC5Q86VE9 423 aa8.11□□□□□ -1.11
LINC00559-201ENST00000569476 GABPB2Q8TAK5 448 aaPredicted RBP8.11□□□□□ -1.11
LINC00559-201ENST00000569476 HAPLN3Q96S86 360 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms