RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 OPLAHO14841 1288 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 ECE2O60344 883 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 MPZL2O60487 215 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 SPDYE6P0CI01 402 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 FCER1AP12319 257 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 BMP3P12645 472 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 RPA1P27694 616 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 FAUP35544 74 aaKnown RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 GEMP55040 296 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 AP1S2P56377 157 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 CDC42P60953 191 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PSMC5P62195 406 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 TMEM53Q6P2H8 277 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 ATG14Q6ZNE5 492 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 FRMD7Q6ZUT3 714 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 THAP5Q7Z6K1 395 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 AGR3Q8TD06 166 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 SH3KBP1Q96B97 665 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 NUDT12Q9BQG2 462 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 COPS7BQ9H9Q2 264 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 FAM92AA1XBS5 289 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 HDAC3O15379 428 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 C8BP07358 591 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 GNL1P36915 607 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 NR2C2P49116 596 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 NPY2RP49146 381 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 CSE1LP55060 971 aaKnown RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 RTP1P59025 263 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 VBP1P61758 197 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF280DQ6N043 979 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 TTC23LQ6PF05 361 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PGAM4Q8N0Y7 254 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 FAXDC2Q96IV6 333 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 WRNIP1Q96S55 665 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 ACAT2Q9BWD1 397 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PLA2G12BQ9BX93 195 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 HDHD2Q9H0R4 259 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PREBQ9HCU5 417 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PCDHA6Q9UN73 950 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PCDHA8Q9Y5H6 950 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 ZSCAN9O15535 394 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 TULP3O75386 442 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 FOSL1P15407 271 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 FASTKQ14296 549 aaKnown RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 POLD3Q15054 466 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 RBBP7Q16576 425 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 SNRNP48Q6IEG0 339 aaKnown RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 SLCO6A1Q86UG4 719 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 OXER1Q8TDS5 423 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 IPCEF1Q8WWN9 437 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 VAT1Q99536 393 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 DENND2DQ9H6A0 471 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 CCSER2Q9H7U1 834 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 SYNDIG1Q9H7V2 258 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 SALL3Q9BXA9 1300 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 MYL12BO14950 172 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PLEKHA8P1O95397 391 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 CYP1A1P04798 512 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PDGFRAP16234 1089 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 NR4A1P22736 598 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 IL6STP40189 918 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PSME3P61289 254 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 TFAMQ00059 246 aaKnown RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 EFR3AQ14156 821 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 PSMD5Q16401 504 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 GLRA4Q5JXX5 417 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 SYTL1Q8IYJ3 562 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 RYBPQ8N488 228 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 LRRN4CLQ8ND94 238 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 RASGRP4Q8TDF6 673 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 RNF139Q8WU17 664 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 C15orf40Q8WUR7 153 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 CINPQ9BW66 212 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 IFT80Q9P2H3 777 aaPredicted RBP7.28□□□□□ -1.24
CNOT1-216ENST00000569240 RAP2CQ9Y3L5 183 aa7.28□□□□□ -1.24
CNOT1-216ENST00000569240 NPHP3-ACAD11A0A0J9YXS1 232 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.27□□□□□ -1.24
CNOT1-216ENST00000569240 ALOX15BO15296 676 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 CTDNEP1O95476 244 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 ITGA2P17301 1181 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 PON1P27169 355 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 PTGER2P43116 358 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 CD97P48960 835 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 NEK3P51956 506 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 LRRC24Q50LG9 513 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 RBM48Q5RL73 367 aaKnown RBP7.27□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF57Q68EA5 555 aaPredicted RBP7.27□□□□□ -1.24
CNOT1-216ENST00000569240 ANO7Q6IWH7 933 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 MRNIPQ6NTE8 343 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 IFNEQ86WN2 208 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 SNX32Q86XE0 403 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 IQCF2Q8IXL9 164 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 SVOPLQ8N434 492 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 PSMA8Q8TAA3 256 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 C9orf43Q8TAL5 461 aaPredicted RBP7.27□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF560Q96MR9 790 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 EMILIN2Q9BXX0 1053 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 PCIF1Q9H4Z3 704 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 ABCB10Q9NRK6 738 aa7.27□□□□□ -1.24
CNOT1-216ENST00000569240 CYP26A1O43174 497 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms