RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CICQ96RK0 1608 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 MAP2P11137 1827 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 USP47Q96K76 1375 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 HMGB1P1B2RPK0 211 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 AP4M1O00189 453 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 APAF1O14727 1248 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 CD3EAPO15446 510 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 PQBP1O60828 265 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 MT-ND5P03915 603 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 NBPF7P0C2Y1 421 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 HSPA1AP0DMV8 641 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 HSPA1BP0DMV9 641 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 BTF3P20290 206 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 FPR3P25089 353 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 ACVR2AP27037 513 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 UQCRC1P31930 480 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 HTR3AP46098 478 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 CARSP49589 748 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 BCAT1P54687 386 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 MRPS21P82921 87 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 E2F1Q01094 437 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 PICALMQ13492 652 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 ARHGEF7Q14155 803 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 SLC29A2Q14542 456 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 KCNAB1Q14722 419 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 PROSER3Q2NL68 480 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 ZNF750Q32MQ0 723 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 TMEM95Q3KNT9 176 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 ZNF782Q6ZMW2 699 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 SLC29A4Q7RTT9 530 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 MORC1Q86VD1 984 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 FANCBQ8NB91 859 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 TTC17Q96AE7 1141 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 VOPP1Q96AW1 172 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 SNX22Q96L94 193 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 STRBPQ96SI9 672 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 THAP7Q9BT49 309 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 NUP62CLQ9H1M0 184 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 DHX36Q9H2U1 1008 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 DKK4Q9UBT3 224 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 LPAR3Q9UBY5 353 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 DRG1Q9Y295 367 aaKnown RBP3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 C4AP0C0L4 1744 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 EVC2Q86UK5 1308 aa3.95□□□□□ -1.78
HMGB1P6-201ENST00000569046 TNRC6CQ9HCJ0 1690 aaKnown RBP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 AFDNP55196 1824 aaKnown RBP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 TISP43B9A030 160 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 RGS10O43665 173 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 PIAS2O75928 621 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 JTBO76095 146 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 NPSP0C0P6 89 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 DPEP1P16444 411 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 TRAPPC10P48553 1259 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 CPT1AP50416 773 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 TPTEP56180 551 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 PSG6Q00889 435 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 TIAL1Q01085 375 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 FOXF2Q12947 444 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 RAPGEF1Q13905 1077 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 COBLL1Q53SF7 1204 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 RNASE12Q5GAN4 147 aaKnown RBP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 L1TD1Q5T7N2 865 aaKnown RBP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 KLHDC7AQ5VTJ3 777 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 PLAG1Q6DJT9 500 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 MYRIPQ8NFW9 859 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 CYP2W1Q8TAV3 490 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 HASPINQ8TF76 798 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 DDB2Q92466 427 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 CTHRC1Q96CG8 243 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 RSPRY1Q96DX4 576 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 SIN3AQ96ST3 1273 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 DPCDQ9BVM2 203 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 ADARB2Q9NS39 739 aaKnown RBP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 LAS1LQ9Y4W2 734 aaKnown RBP3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 SNX13Q9Y5W8 968 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 TIAM2Q8IVF5 1701 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 TTC21AQ8NDW8 1320 aa3.94□□□□□ -1.78
HMGB1P6-201ENST00000569046 VIRMAQ69YN4 1812 aaKnown RBP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 PXDNLA1KZ92 1463 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 CD163L1Q9NR16 1453 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 PALLDQ8WX93 1383 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 MYH14Q7Z406 1995 aaKnown RBP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 A0A087WZ62 844 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 ANO9A1A5B4 782 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 SMIM22K7EJ46 135 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 KPNA5O15131 536 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 PMM2O15305 246 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 PMPCBO75439 489 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 TCEA3O75764 348 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 A1BGP04217 495 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 PRKCGP05129 697 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 MMP10P09238 476 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 PHKG2P15735 406 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 TPH1P17752 444 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 RPL17P18621 184 aaKnown RBP3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 CD53P19397 219 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 IL1R2P27930 398 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 NTSR1P30989 418 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 GKP32189 559 aa3.93□□□□□ -1.78
HMGB1P6-201ENST00000569046 AMPHP49418 695 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms