RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 PELI3Q8N2H9 469 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 ARL14EPQ8N8R7 260 aaPredicted RBP3.5□□□□□ -1.85
BBS4-215ENST00000569001 CCDC150Q8NCX0 1101 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 ACRBPQ8NEB7 543 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 TTC17Q96AE7 1141 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 EME1Q96AY2 570 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 MSI2Q96DH6 328 aaKnown RBP3.5□□□□□ -1.85
BBS4-215ENST00000569001 GPR78Q96P69 363 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 TRMOQ9BU70 441 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 NAA15Q9BXJ9 866 aaKnown RBP3.5□□□□□ -1.85
BBS4-215ENST00000569001 ZCWPW1Q9H0M4 648 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 EPS8L2Q9H6S3 715 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 TMEM8AQ9HCN3 771 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 TMOD4Q9NZQ9 345 aa3.5□□□□□ -1.85
BBS4-215ENST00000569001 SPATA31A1Q5TZJ5 1347 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 IGKV2D-30A0A075B6S6 120 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 A0A0G2JK05 382 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 ZNF814B7Z6K7 855 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 M0QYT0 321 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 KCNQ3O43525 872 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 KAT7O95251 611 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 SLC3A2P08195 630 aaKnown RBP3.49□□□□□ -1.85
BBS4-215ENST00000569001 HOXD12P35452 270 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 ZNF84P51523 738 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 PPATQ06203 517 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 RAPGEF1Q13905 1077 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 SLC35G1Q2M3R5 365 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 PRTGQ2VWP7 1150 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 MIDNQ504T8 468 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 TMEM63BQ5T3F8 832 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 CLASRPQ8N2M8 674 aaKnown RBP3.49□□□□□ -1.85
BBS4-215ENST00000569001 TMEM199Q8N511 208 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 GJA10Q969M2 543 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 C18orf8Q96DM3 657 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 EIF3CQ99613 913 aaKnown RBP3.49□□□□□ -1.85
BBS4-215ENST00000569001 GDF15Q99988 308 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 KRTAP1-5Q9BYS1 174 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 CDCP1Q9H5V8 836 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 SEMA4BQ9NPR2 832 aaPredicted RBP3.49□□□□□ -1.85
BBS4-215ENST00000569001 RGL1Q9NZL6 768 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 B3GNT3Q9Y2A9 372 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 PCDHB7Q9Y5E2 793 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 CACNA1IQ9P0X4 2223 aa3.49□□□□□ -1.85
BBS4-215ENST00000569001 IGLV5-39A0A0G2JS06 123 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 FAM90A10PA6NDY2 464 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 A6NNC1 897 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 J3KTA2 159 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 TULP3O75386 442 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 EGR1P18146 543 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 TNFSF4P23510 183 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 DUSP1P28562 367 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 SLC8A1P32418 973 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 B4GALNT1Q00973 533 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 ATP1A4Q13733 1029 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 LONRF1Q17RB8 773 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 SLC5A9Q2M3M2 681 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 ARL13BQ3SXY8 428 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 FAM209BQ5JX69 171 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 MANEAQ5SRI9 462 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 MSANTD2Q6P1R3 559 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 ACSM6Q6P461 480 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 C9orf47Q6ZRZ4 202 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 RFX8Q6ZV50 586 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 B4GALNT4Q76KP1 1039 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 BEND5Q7L4P6 421 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 KRT27Q7Z3Y8 459 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 CCAR1Q8IX12 1150 aaKnown RBP3.48□□□□□ -1.85
BBS4-215ENST00000569001 OR52L2PQ8NGH6 319 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 SNX27Q96L92 541 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 NLRP4Q96MN2 994 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 SENP7Q9BQF6 1050 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 PIMREGQ9BSJ6 248 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 SARGQ9BW04 601 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 TTLL2Q9BWV7 592 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 FNIP2Q9P278 1114 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 CHPF2Q9P2E5 772 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 UTS2RQ9UKP6 389 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 LRP12Q9Y561 859 aa3.48□□□□□ -1.85
BBS4-215ENST00000569001 TRBV5-3A0A0A0MS03 114 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.47□□□□□ -1.85
BBS4-215ENST00000569001 F8W810 466 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 CTIFO43310 598 aaKnown RBP3.47□□□□□ -1.85
BBS4-215ENST00000569001 EPN2O95208 641 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 VIPP01282 170 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 RFPL3SP0C7P2 107 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 CHRNB1P11230 501 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 HOXB6P17509 224 aaKnown RBP3.47□□□□□ -1.85
BBS4-215ENST00000569001 CCKARP32238 428 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 CCKBRP32239 447 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 THBS3P49746 956 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 DMWDQ09019 674 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 SAFBQ15424 915 aaKnown RBP eCLIP3.47□□□□□ -1.85
BBS4-215ENST00000569001 SMTNL2Q2TAL5 461 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 ANXA2RQ3ZCQ2 193 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 CRELD2Q6UXH1 353 aaPredicted RBP3.47□□□□□ -1.85
BBS4-215ENST00000569001 KSR2Q6VAB6 950 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 UBE2Q1Q7Z7E8 422 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 UEVLDQ8IX04 471 aa3.47□□□□□ -1.85
BBS4-215ENST00000569001 IPO4Q8TEX9 1081 aaKnown RBP3.47□□□□□ -1.85
BBS4-215ENST00000569001 SLC22A17Q8WUG5 538 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms