RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 UNC93AQ86WB7 457 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 BIRC7Q96CA5 298 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 ORAI3Q9BRQ5 295 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 NUP58Q9BVL2 599 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 NT5C1AQ9BXI3 368 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 LRRC27Q9C0I9 530 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 SERGEFQ9UGK8 458 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.56■□□□□ 0.08
USB1-214ENST00000568848 PCDHA5Q9Y5H7 936 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 MORC2Q9Y6X9 1032 aaPredicted RBP15.56■□□□□ 0.08
USB1-214ENST00000568848 CFAP46Q8IYW2 2715 aa15.56■□□□□ 0.08
USB1-214ENST00000568848 PTPRQQ9UMZ3 2332 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 KNTC1P50748 2209 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 FAM47DPA6NHR8 397 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 WNT9AO14904 365 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 FLRT2O43155 660 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 MSI1O43347 362 aaKnown RBP15.55■□□□□ 0.08
USB1-214ENST00000568848 PPP6R2O75170 966 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 C1QL1O75973 258 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 IGLV3-19P01714 112 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 RALAP11233 206 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 HOXD9P28356 352 aaPredicted RBP15.55■□□□□ 0.08
USB1-214ENST00000568848 RPS14P62263 151 aaKnown RBP15.55■□□□□ 0.08
USB1-214ENST00000568848 INCA1Q0VD86 236 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 KLHDC10Q6PID8 442 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 DBX2Q6ZNG2 339 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 BHLHA9Q7RTU4 235 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 PIGZQ86VD9 579 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 OR2T3Q8NH03 318 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 EDEM1Q92611 657 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 SEMA4DQ92854 862 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 MYEOVQ96EZ4 313 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 EEF2KMTQ96G04 330 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 SLC6A18Q96N87 628 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 DUSP16Q9BY84 665 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 CUEDC2Q9H467 287 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 ABCB8Q9NUT2 735 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 MARCH2Q9P0N8 246 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 KIAA1522Q9P206 1035 aaPredicted RBP15.55■□□□□ 0.08
USB1-214ENST00000568848 SFMBT1Q9UHJ3 866 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 MAPK8IP1Q9UQF2 711 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 RAI2Q9Y5P3 530 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 USP3Q9Y6I4 520 aa15.55■□□□□ 0.08
USB1-214ENST00000568848 GOLGA6L7A0A1B0GV03 622 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 PIK3R2O00459 728 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 TLX3O43711 291 aaPredicted RBP15.54■□□□□ 0.08
USB1-214ENST00000568848 SEMA4FO95754 770 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 WNT1P04628 370 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 PRR29P0C7W0 189 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 ZNF883P0CG24 379 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 P4HA1P13674 534 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 OXTRP30559 389 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 YWHAGP61981 247 aaKnown RBP eCLIP15.54■□□□□ 0.08
USB1-214ENST00000568848 SNRPFP62306 86 aaKnown RBP15.54■□□□□ 0.08
USB1-214ENST00000568848 PTPRNQ16849 979 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 CHST9Q7L1S5 443 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 RSRC2Q7L4I2 434 aaKnown RBP15.54■□□□□ 0.08
USB1-214ENST00000568848 UCMAQ8WVF2 138 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 HEXIM2Q96MH2 286 aaKnown RBP15.54■□□□□ 0.08
USB1-214ENST00000568848 ULBP1Q9BZM6 244 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 EBF2Q9HAK2 575 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 PRSS16Q9NQE7 514 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 ASH1LQ9NR48 2969 aaKnown RBP15.54■□□□□ 0.08
USB1-214ENST00000568848 PCDHA7Q9UN72 937 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
USB1-214ENST00000568848 ACTN4O43707 911 aaKnown RBP15.53■□□□□ 0.08
USB1-214ENST00000568848 CALCAP01258 141 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 CD70P32970 193 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 VAMP7P51809 220 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 AFF3P51826 1226 aaKnown RBP15.53■□□□□ 0.08
USB1-214ENST00000568848 AP3M2P53677 418 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 ARID5AQ03989 594 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 CAMK2GQ13555 558 aaPredicted RBP15.53■□□□□ 0.08
USB1-214ENST00000568848 RFWD3Q6PCD5 774 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 ADIPOR2Q86V24 386 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 FMNL3Q8IVF7 1028 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 TATDN2Q93075 761 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 PAGE5Q96GU1 130 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 CDC6Q99741 560 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 NIF3L1Q9GZT8 377 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 TMEM245Q9H330 911 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 SCUBE2Q9NQ36 999 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 ZNF462Q96JM2 2506 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 MYLKQ15746 1914 aa15.53■□□□□ 0.08
USB1-214ENST00000568848 PVALEFA0A1B0GWK0 134 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 EIF4E1BA6NMX2 242 aaKnown RBP15.52■□□□□ 0.08
USB1-214ENST00000568848 CYSRT1A8MQ03 144 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 RPN1P04843 607 aaKnown RBP15.52■□□□□ 0.08
USB1-214ENST00000568848 IGHV4-34P06331 123 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 PDIA4P13667 645 aaKnown RBP15.52■□□□□ 0.08
USB1-214ENST00000568848 CTSKP43235 329 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 TKTL1P51854 596 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 SEMG2Q02383 582 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 PKP1Q13835 747 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 SHBQ15464 509 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 SMAD1Q15797 465 aaKnown RBP15.52■□□□□ 0.08
USB1-214ENST00000568848 RESP18Q5W5W9 173 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 IL27RAQ6UWB1 636 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 SLC4A11Q8NBS3 891 aa15.52■□□□□ 0.08
USB1-214ENST00000568848 ZSCAN16Q9H4T2 348 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms