RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	ARRDC1-AS1	Q9H2J1	176 aa		10.79	□□□□□ -0.68
UBR1-207	ENST00000568782	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.79	□□□□□ -0.68
UBR1-207	ENST00000568782	TMEM51	Q9NW97	253 aa		10.79	□□□□□ -0.68
UBR1-207	ENST00000568782	TAB2	Q9NYJ8	693 aa		10.79	□□□□□ -0.68
UBR1-207	ENST00000568782	TJP2	Q9UDY2	1190 aa		10.79	□□□□□ -0.68
UBR1-207	ENST00000568782	DAAM1	Q9Y4D1	1078 aa		10.79	□□□□□ -0.68
UBR1-207	ENST00000568782	ABCA7	Q8IZY2	2146 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	CFAP54	Q96N23	3096 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	BECN2	A8MW95	431 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	PRRT4	C9JH25	899 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	TRIM24	O15164	1050 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	AP5Z1	O43299	807 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	ACSL4	O60488	711 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	TBL1X	O60907	577 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	HSF2BP	O75031	334 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	NDUFS2	O75306	463 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	EPN2	O95208	641 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	MOCS3	O95396	460 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	CISD3	P0C7P0	127 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	ACADM	P11310	421 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	UCHL3	P15374	230 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	ABCB4	P21439	1286 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	WAS	P42768	502 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	RPL34	P49207	117 aa	Known RBP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	DHPS	P49366	369 aa	Predicted RBP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	MYL5	Q02045	173 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	SYCP1	Q15431	976 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	PLK5	Q496M5	336 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	DCAF6	Q58WW2	860 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	MIIP	Q5JXC2	388 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	MPP7	Q5T2T1	576 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	KLHDC7A	Q5VTJ3	777 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	EGFLAM	Q63HQ2	1017 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	BHLHA9	Q7RTU4	235 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	ERMP1	Q7Z2K6	904 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	PASD1	Q8IV76	773 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	FAM217A	Q8IXS0	508 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	AHI1	Q8N157	1196 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	HJURP	Q8NCD3	748 aa	Predicted RBP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	DQX1	Q8TE96	717 aa	Known RBP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	PPP1R9B	Q96SB3	815 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	STK33	Q9BYT3	514 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	FAM204A	Q9H8W3	233 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	ZDHHC4	Q9NPG8	344 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	VPS45	Q9NRW7	570 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	FANCL	Q9NW38	375 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	ASNSD1	Q9NWL6	643 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	ELOVL2	Q9NXB9	296 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	RRN3	Q9NYV6	651 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	STOML2	Q9UJZ1	356 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	FBXO10	Q9UK96	956 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	NAALADL1	Q9UQQ1	740 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	INVS	Q9Y283	1065 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	PAXBP1	Q9Y5B6	917 aa		10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	EP300	Q09472	2414 aa	Predicted RBP	10.78	□□□□□ -0.68
UBR1-207	ENST00000568782	SMTNL1	A8MU46	457 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782		H0Y626	953 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	PAPSS1	O43252	624 aa	Predicted RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	ADAM23	O75077	832 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	TRUB2	O95900	331 aa	Known RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	MOCS2	O96007	188 aa	Predicted RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	CCDC172	P0C7W6	258 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF806	P0C7X5	589 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	POLR2E	P19388	210 aa	Known RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	PTMS	P20962	102 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	CCR1	P32246	355 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	CLCN1	P35523	988 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	MPL	P40238	635 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	ST8SIA6	P61647	398 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	APBA1	Q02410	837 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	MESP2	Q0VG99	397 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	CDH18	Q13634	790 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	SPDYC	Q5MJ68	293 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	IL31	Q6EBC2	164 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	LRSAM1	Q6UWE0	723 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	SERPINA13P	Q6UXR4	307 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	PRR23C	Q6ZRP0	262 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	RBM43	Q6ZSC3	357 aa	Known RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	DGLUCY	Q7Z3D6	616 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	CYP2U1	Q7Z449	544 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	SLC47A2	Q86VL8	602 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	ERICH1	Q86X53	443 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	ZNF677	Q86XU0	584 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	MFN1	Q8IWA4	741 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	SFTPA1	Q8IWL2	248 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	FAM71A	Q8IYT1	594 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	C1orf131	Q8NDD1	294 aa	Known RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	NEK11	Q8NG66	645 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	NETO1	Q8TDF5	533 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	BTN2A3P	Q96KV6	586 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	SIX2	Q9NPC8	291 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	ACP6	Q9NPH0	428 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	PLCB1	Q9NQ66	1216 aa		10.77	□□□□□ -0.69
UBR1-207	ENST00000568782	CACNA2D2	Q9NY47	1150 aa		10.77	□□□□□ -0.69

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