RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 EPHB2P29323 1055 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 SERPINB6P35237 376 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 PTDSS1P48651 473 aaKnown RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 IGBP1P78318 339 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 PPARDQ03181 441 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 ZNF33AQ06730 810 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 FAAP100Q0VG06 881 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 IFRD2Q12894 506 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 DYNC1I2Q13409 638 aaKnown RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 FASTKD3Q14CZ7 662 aaKnown RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 UGP2Q16851 508 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 KCNT1Q5JUK3 1230 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 JADE1Q6IE81 842 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 LRRC8BQ6P9F7 803 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 GADL1Q6ZQY3 521 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 SDCCAG8Q86SQ7 713 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 LINC00523Q86TU6 105 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 ZC3H18Q86VM9 953 aaKnown RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 TMEM126BQ8IUX1 230 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 HOMEZQ8IX15 550 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 ANKRD13AQ8IZ07 590 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 NDUFAF2Q8N183 169 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 CEP120Q8N960 986 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 STKLD1Q8NE28 680 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 JOSD2Q8TAC2 188 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 RDH11Q8TC12 318 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 FAM172AQ8WUF8 416 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 EMID1Q96A84 441 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 SPDL1Q96EA4 605 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 PTCD3Q96EY7 689 aaKnown RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 PWWP2AQ96N64 755 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 SPATA13Q96N96 652 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 KCNK16Q96T55 309 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 PCYT2Q99447 389 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 CPNE1Q99829 537 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 FAM118BQ9BPY3 351 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 CENPKQ9BS16 269 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 SNX25Q9H3E2 840 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 SUDS3Q9H7L9 328 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 NRDE2Q9H7Z3 1164 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 LRRC40Q9H9A6 602 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 PCDH18Q9HCL0 1135 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 VCX3AQ9NNX9 186 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 SLCO1B3Q9NPD5 702 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 NGRNQ9NPE2 291 aaKnown RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 DNAJC28Q9NX36 388 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 BFARQ9NZS9 450 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 PPARGC1AQ9UBK2 798 aaKnown RBP7.88□□□□□ -1.15
ATXN3-250ENST00000568290 GTF2IRD1Q9UHL9 959 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 TRHDEQ9UKU6 1024 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 ANKRD6Q9Y2G4 727 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 HEY1Q9Y5J3 304 aa7.88□□□□□ -1.15
ATXN3-250ENST00000568290 A0A0G2JLL6 359 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-250ENST00000568290 B2RBV5 119 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 AHCYL1O43865 530 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 SMNDC1O75940 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
ATXN3-250ENST00000568290 ALDH1A2O94788 518 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 TMEM63AO94886 807 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 F9P00740 461 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 CYP3A5P20815 502 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 BGNP21810 368 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 CYP2F1P24903 491 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 IL1R2P27930 398 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 SERPINB3P29508 390 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 HTR7P34969 479 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 GP5P40197 560 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 HSPA13P48723 471 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 NPY2RP49146 381 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 GLUD2P49448 558 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 SERPINB8P50452 374 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 NDST1P52848 882 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 COPAP53621 1224 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 HIRAP54198 1017 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-250ENST00000568290 CSE1LP55060 971 aaKnown RBP7.87□□□□□ -1.15
ATXN3-250ENST00000568290 YWHAZP63104 245 aaKnown RBP7.87□□□□□ -1.15
ATXN3-250ENST00000568290 DSG1Q02413 1049 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 RBBP5Q15291 538 aaKnown RBP7.87□□□□□ -1.15
ATXN3-250ENST00000568290 GOLGA7BQ2TAP0 167 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 SV2CQ496J9 727 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 HSP90AA5PQ58FG0 334 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 ZBTB41Q5SVQ8 909 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 TMCO4Q5TGY1 634 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 C1orf146Q5VVC0 180 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 SNX30Q5VWJ9 437 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 STEAP4Q687X5 459 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 CASC4Q6P4E1 433 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 NOTUMQ6P988 496 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 C1orf228Q6PIY5 440 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 C16orf89Q6UX73 402 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 LRRC74BQ6ZQY2 392 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 PRRT2Q7Z6L0 340 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-250ENST00000568290 NME8Q8N427 588 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 ANKRD52Q8NB46 1076 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 PPTC7Q8NI37 304 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 HTR3CQ8WXA8 447 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 PPP2R3CQ969Q6 453 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 DTNBP1Q96EV8 351 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 GBP5Q96PP8 586 aa7.87□□□□□ -1.15
ATXN3-250ENST00000568290 TSC22D3Q99576 134 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms