RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 DGLUCYQ7Z3D6 616 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 PCGF5Q86SE9 256 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 OR10T2Q8NGX3 314 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 P3H4Q92791 437 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 NTAN1Q96AB6 310 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 CASD1Q96PB1 797 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 ZCWPW1Q9H0M4 648 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 ADAM28Q9UKQ2 775 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 PATJQ8NI35 1801 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 SF3B1O75533 1304 aaKnown RBP eCLIP15.17■□□□□ 0.02
COMMD4-221ENST00000567935 NCOR2Q9Y618 2525 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 GOLGA6L10A6NI86 522 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 H3BQF6 201 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 AGPSO00116 658 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 CAPN9O14815 690 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 GRM6O15303 877 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 LTFP02788 710 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 ITGB1P05556 798 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 CD48P09326 243 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 RARGP13631 454 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 NR2C2P49116 596 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 PMS2P54278 862 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 DCAF6Q58WW2 860 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 RHBDF2Q6PJF5 856 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 C4orf22Q6V702 233 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 BZW1Q7L1Q6 419 aaKnown RBP15.16■□□□□ 0.02
COMMD4-221ENST00000567935 CRIPAKQ8N1N5 446 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 LRRC43Q8N309 656 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 HASPINQ8TF76 798 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 UBLCP1Q8WVY7 318 aaPredicted RBP15.16■□□□□ 0.02
COMMD4-221ENST00000567935 HAUS1Q96CS2 278 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 ZIM3Q96PE6 472 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 YME1L1Q96TA2 773 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 PHACTR1Q9C0D0 580 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 PABPC3Q9H361 631 aaKnown RBP15.16■□□□□ 0.02
COMMD4-221ENST00000567935 NRDE2Q9H7Z3 1164 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 ANAPC5Q9UJX4 755 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 AP4E1Q9UPM8 1137 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 USP3Q9Y6I4 520 aa15.16■□□□□ 0.02
COMMD4-221ENST00000567935 H7C4K7 107 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 SYF2O95926 243 aaKnown RBP15.15■□□□□ 0.02
COMMD4-221ENST00000567935 NUDT17P0C025 328 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 BDNFP23560 247 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 ARL4AP40617 200 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 MAGEA11P43364 429 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 EIF3EP60228 445 aaKnown RBP15.15■□□□□ 0.02
COMMD4-221ENST00000567935 DEUP1Q05D60 604 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 SCAPQ12770 1279 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 XRCC4Q13426 336 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 ADAM15Q13444 863 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 MRPL58Q14197 206 aaKnown RBP15.15■□□□□ 0.02
COMMD4-221ENST00000567935 MORF4L2Q15014 288 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 ANKRD20A8PQ5CZ79 823 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 ZNF280DQ6N043 979 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 RELL1Q8IUW5 271 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 RSAD2Q8WXG1 361 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 FZD10Q9ULW2 581 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 SHOC2Q9UQ13 582 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 PLAAQ9Y263 795 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 FAN1Q9Y2M0 1017 aa15.15■□□□□ 0.02
COMMD4-221ENST00000567935 H3BRJ5 948 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 M0QYT0 321 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 SGK1O00141 431 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 DNALI1O14645 258 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-221ENST00000567935 NRP1O14786 923 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 TRIM66O15016 1216 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 B4GALT3O60512 393 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 RNF40O75150 1001 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 RBP3P10745 1247 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 FGFR3P22607 806 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 IL4RP24394 825 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 L1CAMP32004 1257 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 CTNNB1P35222 781 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 NDUFV1P49821 464 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 ITGA8P53708 1063 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 BCAR1P56945 870 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 DYNLT1P63172 113 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 ROR1Q01973 937 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 UAP1Q16222 522 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-221ENST00000567935 ARL13BQ3SXY8 428 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 EFHC2Q5JST6 749 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 IZUMO3Q5VZ72 239 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 DENND2CQ68D51 928 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 HIBCHQ6NVY1 386 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-221ENST00000567935 HOOK3Q86VS8 718 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 TMEM105Q8N8V8 129 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 SMRP1Q8NCR6 262 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 C2orf15Q8WU43 125 aaKnown RBP15.14■□□□□ 0.01
COMMD4-221ENST00000567935 PIK3R5Q8WYR1 880 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 C8orf48Q96LL4 319 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 RIPOR3Q96MK2 946 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 KCNK16Q96T55 309 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 DHX35Q9H5Z1 703 aaKnown RBP15.14■□□□□ 0.01
COMMD4-221ENST00000567935 CLEC1BQ9P126 229 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 TPX2Q9ULW0 747 aaKnown RBP15.14■□□□□ 0.01
COMMD4-221ENST00000567935 ATP8A1Q9Y2Q0 1164 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 PRG3Q9Y2Y8 225 aaPredicted RBP15.14■□□□□ 0.01
COMMD4-221ENST00000567935 PCDHB5Q9Y5E4 795 aa15.14■□□□□ 0.01
COMMD4-221ENST00000567935 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms