RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
PALB2-205ENST00000567003 DUSP16Q9BY84 665 aa16.23■□□□□ 0.19
PALB2-205ENST00000567003 BACH2Q9BYV9 841 aa16.23■□□□□ 0.19
PALB2-205ENST00000567003 PNPLA8Q9NP80 782 aa16.23■□□□□ 0.19
PALB2-205ENST00000567003 EXOC1Q9NV70 894 aa16.23■□□□□ 0.19
PALB2-205ENST00000567003 CLIC5Q9NZA1 410 aa16.23■□□□□ 0.19
PALB2-205ENST00000567003 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
PALB2-205ENST00000567003 ZNF510Q9Y2H8 683 aa16.23■□□□□ 0.19
PALB2-205ENST00000567003 HELZ2Q9BYK8 2649 aaKnown RBP16.23■□□□□ 0.19
PALB2-205ENST00000567003 TRABD2BA6NFA1 517 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 NPC1O15118 1278 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 FLRT2O43155 660 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 TSPAN3O60637 253 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 DKK1O94907 266 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 ZIC2O95409 532 aaPredicted RBP16.22■□□□□ 0.19
PALB2-205ENST00000567003 CHKAP35790 457 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 PSEN1P49768 467 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 COG7P83436 770 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 IL9RQ01113 521 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 PPP3CAQ08209 521 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 KCNT1Q5JUK3 1230 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 RESP18Q5W5W9 173 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 OR2T3Q8NH03 318 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 ARID3AQ99856 593 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 DCLK3Q9C098 648 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 NIF3L1Q9GZT8 377 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 LHX5Q9H2C1 402 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 MARCH2Q9P0N8 246 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 PCDHA7Q9UN72 937 aa16.22■□□□□ 0.19
PALB2-205ENST00000567003 CYBBP04839 570 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 ME1P48163 572 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 AFF3P51826 1226 aaKnown RBP16.21■□□□□ 0.19
PALB2-205ENST00000567003 ZNF132P52740 706 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 CLDN6P56747 220 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 FNDC3BQ53EP0 1204 aaKnown RBP16.21■□□□□ 0.19
PALB2-205ENST00000567003 DBX2Q6ZNG2 339 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 RSRC2Q7L4I2 434 aaKnown RBP16.21■□□□□ 0.19
PALB2-205ENST00000567003 ZNF276Q8N554 614 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 PAGE5Q96GU1 130 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 CDC6Q99741 560 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 CYP3A43Q9HB55 503 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 TM9SF3Q9HD45 589 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 FAM13BQ9NYF5 915 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 ANKRD6Q9Y2G4 727 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.21■□□□□ 0.19
PALB2-205ENST00000567003 PCDHGB2Q9Y5G2 931 aa16.21■□□□□ 0.19
PALB2-205ENST00000567003 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 H0Y8X5 98 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 ACTN4O43707 911 aaKnown RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 PDIA4P13667 645 aaKnown RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 TRIM21P19474 475 aaKnown RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 HOXD9P28356 352 aaPredicted RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 VAMP7P51809 220 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 YWHAGP61981 247 aaKnown RBP eCLIP16.2■□□□□ 0.18
PALB2-205ENST00000567003 ARID5AQ03989 594 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 CAMK2BQ13554 666 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 CAMK2GQ13555 558 aaPredicted RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 EIF4HQ15056 248 aaKnown RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 ZC3H3Q8IXZ2 948 aaKnown RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 CEP57L1Q8IYX8 460 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 CPXM2Q8N436 756 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 HEXIM2Q96MH2 286 aaKnown RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 CDK5RAP1Q96SZ6 601 aaKnown RBP16.2■□□□□ 0.18
PALB2-205ENST00000567003 IMPG2Q9BZV3 1241 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 FRMD4BQ9Y2L6 1034 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 KALRNO60229 2985 aa16.2■□□□□ 0.18
PALB2-205ENST00000567003 TULP2O00295 520 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 PDXKO00764 312 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 IKBKBO14920 756 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 FSBPO95073 299 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 HLA-FP30511 346 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 SGSHP51688 502 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 RPS14P62263 151 aaKnown RBP16.19■□□□□ 0.18
PALB2-205ENST00000567003 DHRS13Q6UX07 377 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 CHST9Q7L1S5 443 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 PIGZQ86VD9 579 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 FMNL3Q8IVF7 1028 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 FAM217AQ8IXS0 508 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 SEMA4DQ92854 862 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 BIRC7Q96CA5 298 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 ULBP1Q9BZM6 244 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 TMEM245Q9H330 911 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 MTG2Q9H4K7 406 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 STRIP2Q9ULQ0 834 aa16.19■□□□□ 0.18
PALB2-205ENST00000567003 FLNBO75369 2602 aaKnown RBP16.18■□□□□ 0.18
PALB2-205ENST00000567003 KNTC1P50748 2209 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 K7ELQ4 463 aaPredicted RBP16.18■□□□□ 0.18
PALB2-205ENST00000567003 SEMA4FO95754 770 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 CCT8P50990 548 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 TKTL1P51854 596 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 TEAD4Q15561 434 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 PRAMEF14Q5SWL7 426 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 BHLHA9Q7RTU4 235 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 WFDC5Q8TCV5 224 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 DCBLD2Q96PD2 775 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 SLC2A11Q9BYW1 496 aa16.18■□□□□ 0.18
PALB2-205ENST00000567003 PRSS16Q9NQE7 514 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms