RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 SCNN1GP51170 649 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 CA9Q16790 459 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 GLB1LQ6UWU2 654 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 UNC93AQ86WB7 457 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 STKLD1Q8NE28 680 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 TMA16Q96EY4 203 aaKnown RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 OXNAD1Q96HP4 312 aaPredicted RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 ZNF317Q96PQ6 595 aaPredicted RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 SEPT5Q99719 369 aaPredicted RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 NAT9Q9BTE0 207 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 ARHGEF38Q9NXL2 777 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 NRCAMQ92823 1304 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 SMIM28A0A1B0GU29 152 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 PPEF2O14830 753 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 ENTPD5O75356 428 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 LMO2P25791 158 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 MPP3Q13368 585 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 ZNF235Q14590 738 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 PDCD2Q16342 344 aaPredicted RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
CDH1-210ENST00000566612 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDH1-210ENST00000566612 URGCPQ8TCY9 931 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 FNIP1Q8TF40 1166 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 DCDC2Q9UHG0 476 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 STYXL1Q9Y6J8 313 aa11.92□□□□□ -0.5
CDH1-210ENST00000566612 MYH4Q9Y623 1939 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
CDH1-210ENST00000566612 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
CDH1-210ENST00000566612 BTBD19C9JJ37 291 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 ODC1P11926 461 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 CALB2P22676 271 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 DNAL1Q4LDG9 190 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
CDH1-210ENST00000566612 PIGWQ7Z7B1 504 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 TKTL2Q9H0I9 626 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SDCBP2Q9H190 292 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 POPDC2Q9HBU9 364 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 A0A0A0MRY4 1105 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 HCRTO43612 131 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 KLHL2O95198 593 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 PGK1P00558 417 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 F9P00740 461 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SERPINB5P36952 375 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 RGS2P41220 211 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 MGAT5BQ3V5L5 792 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 C9orf57Q5W0N0 161 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 TFAP2DQ7Z6R9 452 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 RFWD2Q8NHY2 731 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 WNT8BQ93098 351 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SPATA13Q96N96 652 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 CYP4F12Q9HCS2 524 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 AAASQ9NRG9 546 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SIX4Q9UIU6 781 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
CDH1-210ENST00000566612 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 C2CD4BA6NLJ0 364 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 MEI4A8MW99 385 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 PFDN6O15212 129 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 PAPSS1O43252 624 aaPredicted RBP11.91□□□□□ -0.5
CDH1-210ENST00000566612 TREHO43280 583 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 MTSS1O43312 755 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 NPR3P17342 541 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 NOS2P35228 1153 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SOX11P35716 441 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 LHX1P48742 406 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 MPP2Q14168 576 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 DUSP28Q4G0W2 176 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 RNF43Q68DV7 783 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SLC35B2Q8TB61 432 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SLCO2A1Q92959 643 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 PGLYRP2Q96PD5 576 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 EBNA1BP2Q99848 306 aaKnown RBP11.91□□□□□ -0.5
CDH1-210ENST00000566612 Q9H521 79 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 EFR3BQ9Y2G0 817 aa11.91□□□□□ -0.5
CDH1-210ENST00000566612 SKAP2O75563 359 aaPredicted RBP11.9□□□□□ -0.5
CDH1-210ENST00000566612 ATG7O95352 703 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 LTFP02788 710 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 ALADP13716 330 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 KLRC2P26717 231 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 SIX1Q15475 284 aaPredicted RBP11.9□□□□□ -0.5
CDH1-210ENST00000566612 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
CDH1-210ENST00000566612 UGP2Q16851 508 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 EML3Q32P44 896 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 APBA2Q99767 749 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 ZNF670Q9BS34 389 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 ZFYVE28Q9HCC9 887 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 CACNG4Q9UBN1 327 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 CDY2AQ9Y6F7 541 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 CDY1Q9Y6F8 540 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 ABCA3Q99758 1704 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 TPP1O14773 563 aa11.9□□□□□ -0.5
CDH1-210ENST00000566612 MT-CO1P00395 513 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms