RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TRIP6Q15654 476 aaKnown RBP17.28■□□□□ 0.36
TSR3-202ENST00000566296 GOLGA7BQ2TAP0 167 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 RAB41Q5JT25 222 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 DCAF12L1Q5VU92 463 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 CHCHD4Q8N4Q1 142 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 DNASE2BQ8WZ79 361 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 PIWIL1Q96J94 861 aaKnown RBP17.28■□□□□ 0.36
TSR3-202ENST00000566296 ARID3AQ99856 593 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 ULBP1Q9BZM6 244 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 ITM2CQ9NQX7 267 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 HESX1Q9UBX0 185 aa17.28■□□□□ 0.36
TSR3-202ENST00000566296 TIMM44O43615 452 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 CER1O95813 267 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 ZBED1O96006 694 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 PRKCHP24723 683 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 HARS2P49590 506 aaKnown RBP17.27■□□□□ 0.36
TSR3-202ENST00000566296 YWHAEP62258 255 aaKnown RBP17.27■□□□□ 0.36
TSR3-202ENST00000566296 MPPE1Q53F39 396 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.36
TSR3-202ENST00000566296 TCERG1LQ5VWI1 586 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 RAB44Q7Z6P3 723 aaPredicted RBP17.27■□□□□ 0.36
TSR3-202ENST00000566296 FMNL3Q8IVF7 1028 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 FAM217AQ8IXS0 508 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 WFIKKN2Q8TEU8 576 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 RNF139Q8WU17 664 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 CAMK1GQ96NX5 476 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 NUP58Q9BVL2 599 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 TSPAN16Q9UKR8 245 aa17.27■□□□□ 0.36
TSR3-202ENST00000566296 HBS1LQ9Y450 684 aaKnown RBP17.27■□□□□ 0.36
TSR3-202ENST00000566296 KNL1Q8NG31 2342 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 XPO1O14980 1071 aaKnown RBP17.26■□□□□ 0.35
TSR3-202ENST00000566296 BCAT2O15382 392 aaPredicted RBP17.26■□□□□ 0.35
TSR3-202ENST00000566296 FTH1P19P0C7X4 201 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 CD19P15391 556 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 COPAP53621 1224 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 UBE2HP62256 183 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 PDE4CQ08493 712 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 BST2Q10589 180 aaKnown RBP17.26■□□□□ 0.35
TSR3-202ENST00000566296 TRIP4Q15650 581 aaPredicted RBP17.26■□□□□ 0.35
TSR3-202ENST00000566296 SGO2Q562F6 1265 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 IL27RAQ6UWB1 636 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 SIX6OS1Q8N1H7 587 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 OR2T3Q8NH03 318 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 SORCS1Q8WY21 1168 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 TSG101Q99816 390 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 LHX5Q9H2C1 402 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 CLEC4EQ9ULY5 219 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 NUMA1Q14980 2115 aa17.26■□□□□ 0.35
TSR3-202ENST00000566296 CABIN1Q9Y6J0 2220 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 ATRXP46100 2492 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 METTL12A8MUP2 240 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 IGLV3-19P01714 112 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 MATKP42679 507 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 ADIGQ0VDE8 80 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 CUL2Q13617 745 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 FNDC3BQ53EP0 1204 aaKnown RBP17.25■□□□□ 0.35
TSR3-202ENST00000566296 PM20D1Q6GTS8 502 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 SMYD4Q8IYR2 804 aaPredicted RBP17.25■□□□□ 0.35
TSR3-202ENST00000566296 ADAMTS14Q8WXS8 1223 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 SNX19Q92543 992 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 TATDN2Q93075 761 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 EEF2KMTQ96G04 330 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 PCED1AQ9H1Q7 454 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 GOLPH3LQ9H4A5 285 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 RMND1Q9NWS8 449 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 APOBEC2Q9Y235 224 aaKnown RBP17.25■□□□□ 0.35
TSR3-202ENST00000566296 ASPMQ8IZT6 3477 aa17.25■□□□□ 0.35
TSR3-202ENST00000566296 FAM221BA6H8Z2 402 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 SLC16A3O15427 465 aaKnown RBP17.24■□□□□ 0.35
TSR3-202ENST00000566296 TSPAN3O60637 253 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 ZNF202O95125 648 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 LATS1O95835 1130 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 HLA-EP13747 358 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 HOXD9P28356 352 aaPredicted RBP17.24■□□□□ 0.35
TSR3-202ENST00000566296 MCCD1P59942 119 aaPredicted RBP17.24■□□□□ 0.35
TSR3-202ENST00000566296 CHST9Q7L1S5 443 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 FAM124AQ86V42 546 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 RBBP8NLQ8NC74 664 aaPredicted RBP17.24■□□□□ 0.35
TSR3-202ENST00000566296 SETD7Q8WTS6 366 aaKnown RBP17.24■□□□□ 0.35
TSR3-202ENST00000566296 NDRG1Q92597 394 aaKnown RBP17.24■□□□□ 0.35
TSR3-202ENST00000566296 GAREM1Q9H706 876 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 FBRSQ9HAH7 460 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 EIF2B4Q9UI10 523 aaKnown RBP17.24■□□□□ 0.35
TSR3-202ENST00000566296 ACACAQ13085 2346 aa17.24■□□□□ 0.35
TSR3-202ENST00000566296 MUC22E2RYF6 1773 aaPredicted RBP17.23■□□□□ 0.35
TSR3-202ENST00000566296 AKAP13Q12802 2813 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 TULP2O00295 520 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 GADD45BO75293 160 aaPredicted RBP17.23■□□□□ 0.35
TSR3-202ENST00000566296 ZNF883P0CG24 379 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 SETSIPP0DME0 302 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 HLA-FP30511 346 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 CBWD6Q4V339 395 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 CBWD3Q5JTY5 395 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 CBWD5Q5RIA9 395 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 BSPRYQ5W0U4 402 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 TMEM215Q68D42 235 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 BHLHA9Q7RTU4 235 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 AHI1Q8N157 1196 aa17.23■□□□□ 0.35
TSR3-202ENST00000566296 EDEM1Q92611 657 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms