RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 USP40Q9NVE5 1235 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 INTS10Q9NVR2 710 aaKnown RBP5.37□□□□□ -1.55
CAPN3-214ENST00000565274 EHD3Q9NZN3 535 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 FAM153AQ9UHL3 310 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 TMEM59LQ9UK28 342 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 BAG5Q9UL15 447 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 NENFQ9UMX5 172 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 PLAAQ9Y263 795 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 TMEM5Q9Y2B1 443 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 EFR3BQ9Y2G0 817 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 MED16Q9Y2X0 877 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 SAMM50Q9Y512 469 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 SESN1Q9Y6P5 492 aa5.37□□□□□ -1.55
CAPN3-214ENST00000565274 A0A0A6YYK5 440 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 IQANK1A0A1B0GTG1 560 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 GOLGA6L7A0A1B0GV03 622 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 A0A1W2PP55 124 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 C5orf60A6NFR6 353 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CAPN14A8MX76 684 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 B4E171 279 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MYO1FO00160 1098 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TRDMT1O14717 391 aaKnown RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TSPAN3O60637 253 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 RASSF9O75901 435 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SEC24DO94855 1032 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 HEXIM1O94992 359 aaKnown RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TTLL1O95922 423 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 FAM107AO95990 144 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 HEXBP07686 556 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 GLI1P08151 1106 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 PAEPP09466 180 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 POLR2MP0CAP2 368 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MYBP10242 640 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 ALADP13716 330 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 VAV1P15498 845 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CIITAP33076 1130 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 RFC4P35249 363 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MDH1P40925 334 aaKnown RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CETN2P41208 172 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 PSMC4P43686 418 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MAPK8P45983 427 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 NPTX2P47972 431 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 KLK7P49862 253 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 NPEPPSP55786 919 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SLC8A3P57103 927 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TUBA4AP68366 448 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MRPS5P82675 430 aaKnown RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 NIPAL4Q0D2K0 466 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 NFIXQ14938 502 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SLC15A2Q16348 729 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SLC18A3Q16572 532 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MAPKAPK3Q16644 382 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SLC9C1Q4G0N8 1177 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CYP27C1Q4G0S4 372 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CCDC40Q4G0X9 1142 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 C2orf27AQ580R0 203 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 DCAF17Q5H9S7 520 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 FAM209AQ5JX71 171 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 FAM26FQ5R3K3 315 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 HP1BP3Q5SSJ5 553 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TMTC4Q5T4D3 741 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 KLHDC7AQ5VTJ3 777 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 NFRKBQ6P4R8 1299 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 C6orf89Q6UWU4 347 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 LHFPL2Q6ZUX7 228 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 EPM2AIP1Q7L775 607 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 FRMD5Q7Z6J6 570 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 STRA8Q7Z7C7 330 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 GALNT7Q86SF2 657 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CCDC50Q8IVM0 306 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MAPKAPK5Q8IW41 473 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SLFN12Q8IYM2 578 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CADM3Q8N126 398 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SH2D3CQ8N5H7 860 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 FAM181AQ8N9Y4 354 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SLC44A5Q8NCS7 719 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TOR1AIP2Q8NFQ8 470 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CEP70Q8NHQ1 597 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 MYCBPAPQ8TBZ2 947 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 AGR3Q8TD06 166 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 PEX13Q92968 403 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 ZKSCAN4Q969J2 545 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 SLC47A1Q96FL8 570 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 ATP6V1G3Q96LB4 118 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 NT5C1BQ96P26 610 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 FERD3LQ96RJ6 166 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 GORASP1Q9BQQ3 440 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 CRB3Q9BUF7 120 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 DDX23Q9BUQ8 820 aaKnown RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 FAM129AQ9BZQ8 928 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 COA1Q9GZY4 146 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 ZWILCHQ9H900 591 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 JMJD4Q9H9V9 463 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TMBIM4Q9HC24 238 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TM9SF3Q9HD45 589 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 PRDM5Q9NQX1 630 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 ZNF277Q9NRM2 450 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 C1GALT1Q9NS00 363 aa5.36□□□□□ -1.55
CAPN3-214ENST00000565274 TRMT13Q9NUP7 481 aaKnown RBP5.36□□□□□ -1.55
CAPN3-214ENST00000565274 NYAP2Q9P242 653 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms