RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PQLC3Q8N755 202 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ZNF781Q8N8C0 355 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CMASQ8NFW8 434 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 LRGUKQ96M69 825 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MIS12Q9H081 205 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CNTN6Q9UQ52 1028 aa21.12■□□□□ 0.97
MAP1LC3B-206ENST00000564844 NDC80O14777 642 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PHKA2P46019 1235 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FAM91A1Q658Y4 838 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 HSPBAP1Q96EW2 488 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 HEXIM2Q96MH2 286 aaKnown RBP21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 OR52B2Q96RD2 323 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PDLIM7Q9NR12 457 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 KLHL2O95198 593 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CRTAMO95727 393 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 LSM8O95777 96 aaKnown RBP21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ERVK-10P10266 1014 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 COX4I1P13073 169 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MLH1P40692 756 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 YWHAEP62258 255 aaKnown RBP21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 NIPA1Q7RTP0 329 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 NIPA2Q8N8Q9 360 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SLC7A3Q8WY07 619 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PRICKLE1Q96MT3 831 aaPredicted RBP21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 C1orf21Q9H246 121 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 COG4Q9H9E3 785 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 C17orf75Q9HAS0 396 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PAK5Q9P286 719 aa21.11■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CCNT2O60583 730 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DLG2Q15700 870 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DUOXA2Q1HG44 320 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 NXNQ6DKJ4 435 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 AKT1S1Q96B36 256 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TMIGD2Q96BF3 282 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SF3B1O75533 1304 aaKnown RBP eCLIP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 KLRG2A4D1S0 409 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CSPG5O95196 566 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 HNRNPCP07910 306 aaKnown RBP eCLIP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 KCNA2P16389 499 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 XRCC1P18887 633 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TFE3P19532 575 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TYK2P29597 1187 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CDKL1Q00532 357 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PCLAFQ15004 111 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TMEM198Q66K66 360 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 C12orf29Q8N999 325 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 GSDMBQ8TAX9 411 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SIGLEC10Q96LC7 697 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RNF157Q96PX1 679 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SORT1Q99523 831 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CAB39LQ9H9S4 337 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SEPT10Q9P0V9 454 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CHADO15335 359 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ASPAP45381 313 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TAP1Q03518 808 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PGM2L1Q6PCE3 622 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 B3GNT6Q6ZMB0 384 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PQLC1Q8N2U9 271 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SDCBP2Q9H190 292 aa21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DHX35Q9H5Z1 703 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 GNEQ9Y223 722 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3B-206ENST00000564844 EPHA3P29320 983 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RPL5P46777 297 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SLFN12LQ6IEE8 588 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 VSIG10LQ86VR7 867 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SNX32Q86XE0 403 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PCDH19Q8TAB3 1148 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ACTRT2Q8TDY3 377 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 QTRT2Q9H974 415 aaKnown RBP21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ANLNQ9NQW6 1124 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RNF19AQ9NV58 838 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 DNAJB4Q9UDY4 337 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 TBC1D30Q9Y2I9 924 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ZNF711Q9Y462 761 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 GOLGA8TH3BQL2 631 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RALBP11234 206 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PRKCHP24723 683 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 THOP1P52888 689 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MYBPC1Q00872 1141 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CAPSQ13938 189 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 CMTM5Q96DZ9 223 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 XPNPEP3Q9NQH7 507 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SSX2IPQ9Y2D8 614 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 HES2Q9Y543 173 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SLX4Q8IY92 1834 aa21.09■□□□□ 0.97
MAP1LC3B-206ENST00000564844 USP12O75317 370 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MICAL2O94851 1124 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 HSPA4LO95757 839 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SLC10A2Q12908 348 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FLOT2Q14254 428 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 MAP7D3Q8IWC1 876 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RTKN2Q8IZC4 609 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 PLD6Q8N2A8 252 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 RAB3IL1Q8TBN0 382 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FAM151AQ8WW52 585 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ZNF512Q96ME7 567 aaPredicted RBP21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 EBNA1BP2Q99848 306 aaKnown RBP21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 SLC38A10Q9HBR0 1119 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 FAM49BQ9NUQ9 324 aa21.08■□□□□ 0.97
MAP1LC3B-206ENST00000564844 ZDHHC7Q9NXF8 308 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms