RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 RPS6KA4O75676 772 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 RASSF9O75901 435 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 WNT11O96014 354 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 CYP21A2P08686 494 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 SFTPCP11686 197 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 BTF3P20290 206 aaKnown RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 GRK5P34947 590 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 KRT2P35908 639 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 TCF7P36402 384 aaPredicted RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 MTHFRP42898 656 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 GPC3P51654 580 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 HSD17B4P51659 736 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 RBM5P52756 815 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 RARSP54136 660 aaKnown RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 ALDH18A1P54886 795 aaKnown RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 RRP1P56182 461 aaKnown RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 ZNF200P98182 395 aaPredicted RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 CBX3Q13185 183 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 SGCGQ13326 291 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 TMED1Q13445 227 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 RPS6KA2Q15349 733 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 SLC15A2Q16348 729 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 KBTBD12Q3ZCT8 623 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 KRBOX4Q5JUW0 171 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 FAXCQ5TGI0 409 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 ANO7Q6IWH7 933 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 ZPBP2Q6X784 338 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 Q6ZVL8 140 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 RAB11FIP2Q7L804 512 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM129CQ86XR2 697 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 DTX1Q86Y01 620 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 ULK2Q8IYT8 1036 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 C10orf53Q8N6V4 93 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 GPR156Q8NFN8 814 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 NFKBIDQ8NI38 313 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 RMDN1Q96DB5 314 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 BICD1Q96G01 975 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM84AQ96KN4 292 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 PHACTR3Q96KR7 559 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 FER1L6-AS2Q96M78 137 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 CDADC1Q9BWV3 514 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 NYXQ9GZU5 481 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 SLAMF7Q9NQ25 335 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 PLA2G3Q9NZ20 509 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 SELENONQ9NZV5 590 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 MRPL15Q9P015 296 aaKnown RBP5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 NDUFAF4Q9P032 175 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 KCNH3Q9ULD8 1083 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 ANGPTL3Q9Y5C1 460 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 PCDHB6Q9Y5E3 794 aa5.52□□□□□ -1.53
VPS35P1-201ENST00000563400 CRYBG1Q9Y4K1 1723 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 CEMIPQ8WUJ3 1361 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 KDM3AQ9Y4C1 1321 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM90A18PA6NE21 464 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM90A16PA6NEW6 464 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM90A9PA6NNJ1 464 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM90A5PA8MXJ8 464 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 ACOT7O00154 380 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 RAB27BO00194 218 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 PSMA7O14818 248 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 PSMD10O75832 226 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 TPPPO94811 219 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 PDE8BO95263 885 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 C22orf31O95567 290 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FUCA1P04066 466 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 AMY1AP04745 511 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 TPOP07202 933 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM90A15PP0C7V4 464 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM90A14PP0C7W9 464 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 HOXA11P31270 313 aaPredicted RBP5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 GJA4P35212 333 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 EPHA5P54756 1037 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 SH3BGRP55822 239 aaPredicted RBP5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 MECOMQ03112 1051 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 RAB32Q13637 225 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 GRM4Q14833 912 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 GALNTL6Q49A17 601 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 ZNF628Q5EBL2 1059 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 ZNF484Q5JVG2 852 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 OLFML2BQ68BL8 750 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 INO80CQ6PI98 192 aaPredicted RBP5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 ZDHHC24Q6UX98 284 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 ISLR2Q6UXK2 745 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 ADGRG6Q86SQ4 1221 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 KIAA2013Q8IYS2 634 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 SLC15A4Q8N697 577 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 AOPEPQ8N6M6 819 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 USP38Q8NB14 1042 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 FBXO30Q8TB52 745 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 GIMAP1Q8WWP7 306 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 CLEC4DQ8WXI8 215 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 ATP6V0A1Q93050 837 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 SYAP1Q96A49 352 aaPredicted RBP5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 SLC22A18Q96BI1 424 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 CHFRQ96EP1 664 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 PSMG3-AS1Q96PY0 264 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 GCNAQ96QF7 691 aa5.51□□□□□ -1.53
VPS35P1-201ENST00000563400 AGAP2Q99490 1192 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms