RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 EFHC1Q5JVL4 640 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 MFSD5Q6N075 450 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 RRAGAQ7L523 313 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CACNA2D4Q7Z3S7 1137 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 SCN4BQ8IWT1 228 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 RTL3Q8N8U3 475 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 OR14C36Q8NHC7 312 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 IL31RAQ8NI17 732 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 SCAMP5Q8TAC9 235 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.96□□□□□ -1.62
SMG1-207ENST00000563235 MIPOL1Q8TD10 442 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 BRF1Q92994 677 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 FCRL4Q96PJ5 515 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ALS2CR12Q96Q35 445 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 HNRNPABQ99729 332 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 CACNG6Q9BXT2 260 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 SCPEP1Q9HB40 452 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 FBRSL1Q9HCM7 1045 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 SAYSD1Q9NPB0 183 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 RBM12Q9NTZ6 932 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 DERAQ9Y315 318 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ZNF518AQ6AHZ1 1483 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 RTEL1-TNFRSF6BF6WH68 1400 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 SENP3-EIF4A1A0A087X0R7 540 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CCDC151A5D8V7 595 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 NDUFS8O00217 210 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 PODXLO00592 558 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CD3EAPO15446 510 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 GMFGO60234 142 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 NEBLO76041 1014 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 GNA14O95837 355 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ARP10275 920 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 KITP10721 976 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 PECAM1P16284 738 aaPredicted RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 GRNP28799 593 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 AVPR2P30518 371 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 RFC2P35250 354 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ADCY8P40145 1251 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 MTNR1BP49286 362 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 RPS3AP61247 264 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 GUCY1A3Q02108 690 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 LMAN2Q12907 356 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 GPM6BQ13491 265 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CAPSQ13938 189 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 SPRED3Q2MJR0 410 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 PPP1R26Q5T8A7 1209 aaPredicted RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 GRTP1Q5TC63 336 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ATG16L1Q676U5 607 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ERICH5Q6P6B1 374 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 FBXO38Q6PIJ6 1188 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 FAM111BQ6SJ93 734 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ZNF771Q7L3S4 317 aaPredicted RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 DENND6AQ8IWF6 608 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 MCEMP1Q8IX19 187 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CMTR1Q8N1G2 835 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 MPP5Q8N3R9 675 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 FAM181AQ8N9Y4 354 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 PHOSPHO2Q8TCD6 241 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ST7LQ8TDW4 575 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CHURC1Q8WUH1 139 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 KIFAP3Q92845 792 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 NEIL1Q96FI4 390 aaPredicted RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 MASTLQ96GX5 879 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 RBM41Q96IZ5 413 aaKnown RBP4.96□□□□□ -1.62
SMG1-207ENST00000563235 MAML3Q96JK9 1138 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 ORAI2Q96SN7 254 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 SLC25A18Q9H1K4 315 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 LIN7BQ9HAP6 207 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 IL21RQ9HBE5 538 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 MAGEE1Q9HCI5 957 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 LMBRD1Q9NUN5 540 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 TBC1D23Q9NUY8 699 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 P4HTMQ9NXG6 502 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CYP39A1Q9NYL5 469 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 B4GALT6Q9UBX8 382 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 CARMIL1Q5VZK9 1371 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 NPC1L1Q9UHC9 1359 aa4.96□□□□□ -1.62
SMG1-207ENST00000563235 FAM135AQ9P2D6 1515 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ABCA6Q8N139 1617 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 A0A1B0GWJ7 208 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 LRRD1A4D1F6 860 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 OR5K4A6NMS3 321 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 GOLGA8CPA6NN73 597 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ZNF263O14978 683 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 TO15178 435 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 DNAJB6O75190 326 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CLN5O75503 358 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CHRNA1P02708 482 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 PABPC4LP0CB38 370 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 PRKCAP17252 672 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CYP2A7P20853 494 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 CST5P28325 142 aaPredicted RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 HOXA6P31267 233 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 ME1P48163 572 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 HARS2P49590 506 aaKnown RBP4.95□□□□□ -1.62
SMG1-207ENST00000563235 IRAK1P51617 712 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 POLR2GP62487 172 aaKnown RBP eCLIP4.95□□□□□ -1.62
SMG1-207ENST00000563235 XIAPP98170 497 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 XRCC4Q13426 336 aa4.95□□□□□ -1.62
SMG1-207ENST00000563235 MED22Q15528 200 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 268.2 ms