RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SLC9A7Q96T83 725 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 TRABDQ9H4I3 376 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 FBXW11Q9UKB1 542 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 TTC3P53804 2025 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 TCRBV9S1A1TA0A576 114 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 DCLK1O15075 740 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 SCAPQ12770 1279 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 SEMA3BQ13214 749 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 PM20D1Q6GTS8 502 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 TAX1BP1Q86VP1 789 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 VPS52Q8N1B4 723 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 CFAP36Q96G28 342 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 CEP41Q9BYV8 373 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 PLAC1Q9HBJ0 212 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMPD3-203ENST00000563226 GRIA1P42261 906 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 YWHAGP61981 247 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 DSC1Q08554 894 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 PRKD1Q15139 912 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 RASA2Q15283 850 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 BSPRYQ5W0U4 402 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 DENND5BQ6ZUT9 1274 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 TAC4Q86UU9 113 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 REM2Q8IYK8 340 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 DCAKDQ8WVC6 231 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 TSEN34Q9BSV6 310 aaKnown RBP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 COLEC11Q9BWP8 271 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 DNAJB4Q9UDY4 337 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 HACD1B0YJ81 288 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 TOMM70O94826 608 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 VIMP08670 466 aaKnown RBP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 TSHRP16473 764 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 TYMPP19971 482 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 AP1B1Q10567 949 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 IFRD2Q12894 506 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 NR1H3Q13133 447 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 CBLBQ13191 982 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 PAFAH1B3Q15102 231 aaKnown RBP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 KLHL38Q2WGJ6 581 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 ANKRD20A2Q5SQ80 823 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 ANKRD20A1Q5TYW2 823 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 ANKRD20A3Q5VUR7 823 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 ADGRD1Q6QNK2 874 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 C6orf89Q6UWU4 347 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 ARHGEF18Q6ZSZ5 1173 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 THEM5Q8N1Q8 247 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 TRIM56Q9BRZ2 755 aaKnown RBP19.74■□□□□ 0.75
SMPD3-203ENST00000563226 PRDM12Q9H4Q4 367 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 PPCSQ9HAB8 311 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 FETUBQ9UGM5 382 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 PCDHB8Q9UN66 801 aa19.74■□□□□ 0.75
SMPD3-203ENST00000563226 MYO16Q9Y6X6 1858 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 VWA8A3KMH1 1905 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 MYO1CO00159 1063 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 EOMESO95936 686 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 ERCC2P18074 760 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 PGFP49763 221 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 WDR4P57081 412 aaKnown RBP19.73■□□□□ 0.75
SMPD3-203ENST00000563226 FAM189BP81408 668 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 TSPY1Q01534 308 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 YWHAHQ04917 246 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-203ENST00000563226 NOMO2Q5JPE7 1267 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 PRPF39Q86UA1 669 aaKnown RBP19.73■□□□□ 0.75
SMPD3-203ENST00000563226 COLGALT2Q8IYK4 626 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 MCUQ8NE86 351 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 MZB1Q8WU39 189 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 CKAP2Q8WWK9 683 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 IRGQQ8WZA9 623 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 P2RY11Q96G91 374 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 HMX1Q9NP08 348 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-203ENST00000563226 TBC1D13Q9NVG8 400 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 PRG3Q9Y2Y8 225 aaPredicted RBP19.73■□□□□ 0.75
SMPD3-203ENST00000563226 TTLL3Q9Y4R7 772 aa19.73■□□□□ 0.75
SMPD3-203ENST00000563226 SF3B1O75533 1304 aaKnown RBP eCLIP19.72■□□□□ 0.75
SMPD3-203ENST00000563226 A0A0A0MRY4 1105 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 FAM47DPA6NHR8 397 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 TCP11X1B4DZS4 312 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 C1QAP02745 245 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 MAGEA3P43357 314 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 SEMA5AQ13591 1074 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 KBTBD12Q3ZCT8 623 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 GKAP1Q5VSY0 366 aaPredicted RBP19.72■□□□□ 0.75
SMPD3-203ENST00000563226 C4orf22Q6V702 233 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 MPP5Q8N3R9 675 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 SPATA13Q96N96 652 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 TKTL2Q9H0I9 626 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 NKIRAS1Q9NYS0 192 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 RNF103O00237 685 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 TRIM66O15016 1216 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 ATP2A2P16615 1042 aaKnown RBP19.72■□□□□ 0.75
SMPD3-203ENST00000563226 TPSB2P20231 275 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 OR1G1P47890 313 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 CXCR3P49682 368 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 AIF1P55008 147 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 CORO7P57737 925 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 TPI1P60174 286 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 IFT88Q13099 833 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 TPSAB1Q15661 275 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 CACNA2D3Q8IZS8 1091 aa19.72■□□□□ 0.75
SMPD3-203ENST00000563226 NPWQ8N729 165 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms