RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 PCDH15Q96QU1 1955 aa17.35■□□□□ 0.37
CMTM3-205ENST00000562707 CACNA1EQ15878 2313 aa17.35■□□□□ 0.37
CMTM3-205ENST00000562707 SPEGQ15772 3267 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 PCNX2A6NKB5 2137 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 ZBED1O96006 694 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 TKTL1P51854 596 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 SUZ12Q15022 739 aaKnown RBP17.34■□□□□ 0.37
CMTM3-205ENST00000562707 ACAP1Q15027 740 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 RAB41Q5JT25 222 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 ARHGAP17Q68EM7 881 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 SLCO6A1Q86UG4 719 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 GUF1Q8N442 669 aaKnown RBP17.34■□□□□ 0.37
CMTM3-205ENST00000562707 SLC4A11Q8NBS3 891 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 OR2T3Q8NH03 318 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 RHBDD1Q8TEB9 315 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 RNF139Q8WU17 664 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 SNX19Q92543 992 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 ARID3AQ99856 593 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 LHX5Q9H2C1 402 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 OLA1Q9NTK5 396 aaKnown RBP17.34■□□□□ 0.37
CMTM3-205ENST00000562707 RAB20Q9NX57 234 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 PCDHGB2Q9Y5G2 931 aa17.34■□□□□ 0.37
CMTM3-205ENST00000562707 MYO18AQ92614 2054 aaKnown RBP17.33■□□□□ 0.37
CMTM3-205ENST00000562707 AKAP13Q12802 2813 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 STX10O60499 249 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 TSPAN3O60637 253 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 SYKP43405 635 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 RAD23BP54727 409 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 ZNF445P59923 1031 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 TEAD4Q15561 434 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 TRIP4Q15650 581 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-205ENST00000562707 FNDC3BQ53EP0 1204 aaKnown RBP17.33■□□□□ 0.36
CMTM3-205ENST00000562707 TMEM215Q68D42 235 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 PM20D1Q6GTS8 502 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 C19orf48Q6RUI8 117 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 FAM217AQ8IXS0 508 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 RBBP8NLQ8NC74 664 aaPredicted RBP17.33■□□□□ 0.36
CMTM3-205ENST00000562707 FBXL13Q8NEE6 735 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 WFIKKN2Q8TEU8 576 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 SEMA4DQ92854 862 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 ULBP1Q9BZM6 244 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 LRRC4Q9HBW1 653 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 HPSEQ9Y251 543 aa17.33■□□□□ 0.36
CMTM3-205ENST00000562707 FNDC3AQ9Y2H6 1198 aaKnown RBP17.33■□□□□ 0.36
CMTM3-205ENST00000562707 A0A1B0GVT2 93 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 FLRT2O43155 660 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 HLA-EP13747 358 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 CSNK1EP49674 416 aaKnown RBP17.32■□□□□ 0.36
CMTM3-205ENST00000562707 MXI1P50539 228 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 AFF3P51826 1226 aaKnown RBP17.32■□□□□ 0.36
CMTM3-205ENST00000562707 BNC1Q01954 994 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 CAMK2GQ13555 558 aaPredicted RBP17.32■□□□□ 0.36
CMTM3-205ENST00000562707 DBX2Q6ZNG2 339 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 FMNL3Q8IVF7 1028 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
CMTM3-205ENST00000562707 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 IPO9Q96P70 1041 aaKnown RBP17.32■□□□□ 0.36
CMTM3-205ENST00000562707 HESX1Q9UBX0 185 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 HBS1LQ9Y450 684 aaKnown RBP17.32■□□□□ 0.36
CMTM3-205ENST00000562707 GPSM3Q9Y4H4 160 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 PI4KAP42356 2102 aa17.32■□□□□ 0.36
CMTM3-205ENST00000562707 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 HOXD9P28356 352 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-205ENST00000562707 PDE4CQ08493 712 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 DPYDQ12882 1025 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 PKP1Q13835 747 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 GOLGA7BQ2TAP0 167 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 CHST9Q7L1S5 443 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 C1orf216Q8TAB5 229 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 CYB5D2Q8WUJ1 264 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 NDRG1Q92597 394 aaKnown RBP17.31■□□□□ 0.36
CMTM3-205ENST00000562707 TATDN2Q93075 761 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 BTBD1Q9H0C5 482 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 C6orf106Q9H6K1 298 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-205ENST00000562707 FBRSQ9HAH7 460 aa17.31■□□□□ 0.36
CMTM3-205ENST00000562707 ADAMTS9Q9P2N4 1935 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 XPO1O14980 1071 aaKnown RBP17.3■□□□□ 0.36
CMTM3-205ENST00000562707 CETN3O15182 167 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 DNTTP04053 509 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ATXN1LP0C7T5 689 aaKnown RBP17.3■□□□□ 0.36
CMTM3-205ENST00000562707 EPB41P11171 864 aaKnown RBP17.3■□□□□ 0.36
CMTM3-205ENST00000562707 HLA-FP30511 346 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ACSL1P33121 698 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 NDUFA8P51970 172 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 BCAT1P54687 386 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 MCCD1P59942 119 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ZBTB16Q05516 673 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 SGO2Q562F6 1265 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ADGRF1Q5T601 910 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 BSPRYQ5W0U4 402 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 TMPRSS7Q7RTY8 843 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 AHI1Q8N157 1196 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ENGASEQ8NFI3 743 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 TMEM245Q9H330 911 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 OSGEPQ9NPF4 335 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ABCB8Q9NUT2 735 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 SFMBT1Q9UHJ3 866 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 TSPAN16Q9UKR8 245 aa17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-205ENST00000562707 ATRXP46100 2492 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms