RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 GPS1Q13098 491 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 DUSP4Q13115 394 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 PPIGQ13427 754 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDH13-205ENST00000562307 RAB33AQ14088 237 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 MORF4L2Q15014 288 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 P3H1Q32P28 736 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 MGAT5BQ3V5L5 792 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 SLC45A4Q5BKX6 768 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 ARTNQ5T4W7 220 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 RNASEH2BQ5TBB1 312 aaKnown RBP9.86□□□□□ -0.83
CDH13-205ENST00000562307 FAM72AQ5TYM5 149 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 SDHAF4Q5VUM1 108 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 FAM72DQ6L9T8 149 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 DARS2Q6PI48 645 aaKnown RBP9.86□□□□□ -0.83
CDH13-205ENST00000562307 C4orf22Q6V702 233 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 CEP128Q6ZU80 1094 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 RFX8Q6ZV50 586 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 PCGF5Q86SE9 256 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 PRUNE1Q86TP1 453 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 HOOK3Q86VS8 718 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 FAM72BQ86X60 149 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 CDKL3Q8IVW4 592 aaPredicted RBP9.86□□□□□ -0.83
CDH13-205ENST00000562307 ZCCHC9Q8N567 271 aaKnown RBP9.86□□□□□ -0.83
CDH13-205ENST00000562307 FAM71DQ8N9W8 422 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 ZNF461Q8TAF7 563 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 CASP10Q92851 521 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 SLC39A13Q96H72 371 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 TMEM169Q96HH4 297 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 SERPINB11Q96P15 392 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 UBE2OQ9C0C9 1292 aaKnown RBP9.86□□□□□ -0.83
CDH13-205ENST00000562307 PHACTR1Q9C0D0 580 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 TKTL2Q9H0I9 626 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 EPB41L4BQ9H329 900 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 PABPC3Q9H361 631 aaKnown RBP9.86□□□□□ -0.83
CDH13-205ENST00000562307 PRDM10Q9NQV6 1147 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 ETNK2Q9NVF9 386 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 DTLQ9NZJ0 730 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 COX16Q9P0S2 106 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 PLAAQ9Y263 795 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
CDH13-205ENST00000562307 HEY1Q9Y5J3 304 aa9.86□□□□□ -0.83
CDH13-205ENST00000562307 C5orf60A6NFR6 353 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 SLC38A8A6NNN8 435 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 EEF2KO00418 725 aaKnown RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 LILRB3O75022 631 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 GCATO75600 419 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 SOAT2O75908 522 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 GJB5O95377 273 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 IFNB1P01574 187 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 LINC00271P0C7V0 271 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 ATF6P18850 670 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 EN2P19622 333 aaPredicted RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 RBL1P28749 1068 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 OAS2P29728 719 aaKnown RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 HOXC13P31276 330 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 CCR1P32246 355 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 PPM1AP35813 382 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 VPS41P49754 854 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 TAF10Q12962 218 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 HSP90B2PQ58FF3 399 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 SPOUT1Q5T280 376 aaKnown RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 SNX30Q5VWJ9 437 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 KIAA1841Q6NSI8 718 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 PDZD4Q76G19 769 aaPredicted RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 TRMT10CQ7L0Y3 403 aaKnown RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 TMCO2Q7Z6W1 182 aaPredicted RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 ZC3H18Q86VM9 953 aaKnown RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 OVCA2Q8WZ82 227 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 FBXO32Q969P5 355 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 C1orf74Q96LT6 269 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 QKIQ96PU8 341 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDH13-205ENST00000562307 SEPT5Q99719 369 aaPredicted RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 EPAS1Q99814 870 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 TMEM109Q9BVC6 243 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 MCOLN1Q9GZU1 580 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 SEMA4AQ9H3S1 761 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 C10orf88Q9H8K7 445 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 RXFP1Q9HBX9 757 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 TLR8Q9NR97 1041 aaKnown RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 OLA1Q9NTK5 396 aaKnown RBP9.85□□□□□ -0.83
CDH13-205ENST00000562307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDH13-205ENST00000562307 GMIPQ9P107 970 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 FNIP2Q9P278 1114 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 PAK5Q9P286 719 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 OR12D3Q9UGF7 316 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 SHOC2Q9UQ13 582 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 TLR6Q9Y2C9 796 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 ATP8A1Q9Y2Q0 1164 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 PLXNA3P51805 1871 aa9.85□□□□□ -0.83
CDH13-205ENST00000562307 GOLGA8KD6RF30 607 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 NCAM2O15394 837 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 KCNN4O15554 427 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 CREB3O43889 395 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 LRIG2O94898 1065 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 SEC24AO95486 1093 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 SLC2A3P11169 496 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 ERCC2P18074 760 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 RPL17P18621 184 aaKnown RBP9.84□□□□□ -0.83
CDH13-205ENST00000562307 CHKAP35790 457 aa9.84□□□□□ -0.83
CDH13-205ENST00000562307 MAGEA6P43360 314 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms