RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 NR1I3Q14994 352 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 CDO1Q16878 200 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 PREPLQ4J6C6 727 aaPredicted RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 MPPE1Q53F39 396 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 TDRD12Q587J7 1177 aaKnown RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 ADGRF1Q5T601 910 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 SFMBT2Q5VUG0 894 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 RAP1GAP2Q684P5 730 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 SDE2Q6IQ49 451 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 ZC3H14Q6PJT7 736 aaKnown RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 OLFML1Q6UWY5 402 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 SND1Q7KZF4 910 aaKnown RBP eCLIP10.52□□□□□ -0.73
HERC1-212ENST00000561348 CHSY1Q86X52 802 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 ZNF677Q86XU0 584 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 CHPFQ8IZ52 775 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 MAML2Q8IZL2 1156 aaPredicted RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 LGI2Q8N0V4 545 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 CARNMT1Q8N4J0 409 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 EMC1Q8N766 993 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 ZNF513Q8N8E2 541 aaPredicted RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 TXNDC5Q8NBS9 432 aaKnown RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 EZH1Q92800 747 aaPredicted RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 PCDHB18PQ96TA0 734 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 AGPAT1Q99943 283 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.52□□□□□ -0.73
HERC1-212ENST00000561348 CIPCQ9C0C6 399 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 SIK2Q9H0K1 926 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 METTL5Q9NRN9 209 aaKnown RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.52□□□□□ -0.73
HERC1-212ENST00000561348 ADAM22Q9P0K1 906 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 BCCIPQ9P287 314 aaKnown RBP eCLIP10.52□□□□□ -0.73
HERC1-212ENST00000561348 NOCTQ9UK39 431 aaKnown RBP10.52□□□□□ -0.73
HERC1-212ENST00000561348 FBXO4Q9UKT5 387 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 INVSQ9Y283 1065 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 TLR6Q9Y2C9 796 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 DAAM1Q9Y4D1 1078 aa10.52□□□□□ -0.73
HERC1-212ENST00000561348 DAB1O75553 588 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 SLC6A4P31645 630 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 NOS2P35228 1153 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 RPL34P49207 117 aaKnown RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 SGSHP51688 502 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 DGKEP52429 567 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 ATP11AP98196 1134 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 DEUP1Q05D60 604 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 SRSF5Q13243 272 aaKnown RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 CLEC16AQ2KHT3 1053 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 TRIM72Q6ZMU5 477 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 CEP68Q76N32 757 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 XYLT1Q86Y38 959 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 DNAAF5Q86Y56 855 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 KIAA1958Q8N8K9 716 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 ATP6V0D2Q8N8Y2 350 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 TERB1Q8NA31 727 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 ZNF397Q8NF99 534 aaPredicted RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 TSTD1Q8NFU3 115 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 CCDC26Q8TAB7 109 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 USP33Q8TEY7 942 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 ACDQ96AP0 544 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 FCRL2Q96LA5 508 aaPredicted RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 DDX50Q9BQ39 737 aaKnown RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 SELENOOQ9BVL4 669 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 TPSD1Q9BZJ3 242 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 XPO4Q9C0E2 1151 aaKnown RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 NUCKS1Q9H1E3 243 aaKnown RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 XPO7Q9UIA9 1087 aaKnown RBP10.51□□□□□ -0.73
HERC1-212ENST00000561348 CLEC4EQ9ULY5 219 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 STAP1Q9ULZ2 295 aa10.51□□□□□ -0.73
HERC1-212ENST00000561348 A0A1W2PQC6 194 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 H0Y626 953 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 ZBTB24O43167 697 aaPredicted RBP10.5□□□□□ -0.73
HERC1-212ENST00000561348 IRAK2O43187 625 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 CACNG3O60359 315 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 GLI1P08151 1106 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 TFE3P19532 575 aaPredicted RBP10.5□□□□□ -0.73
HERC1-212ENST00000561348 CCR1P32246 355 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 CDH5P33151 784 aaPredicted RBP10.5□□□□□ -0.73
HERC1-212ENST00000561348 EIF2DP41214 584 aaKnown RBP10.5□□□□□ -0.73
HERC1-212ENST00000561348 MATKP42679 507 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 TNFRSF4P43489 277 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 MRE11P49959 708 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 NRLP54845 237 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 RPS24P62847 133 aaKnown RBP10.5□□□□□ -0.73
HERC1-212ENST00000561348 KLHL30Q0D2K2 578 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 CDH18Q13634 790 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 GEN1Q17RS7 908 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 FYB2Q5VWT5 728 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 EGFLAMQ63HQ2 1017 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 ANO7Q6IWH7 933 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 SLC26A9Q7LBE3 791 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 CIR1Q86X95 450 aaPredicted RBP10.5□□□□□ -0.73
HERC1-212ENST00000561348 ZDHHC17Q8IUH5 632 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 MFN1Q8IWA4 741 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 ETFBKMTQ8IXQ9 262 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 CPXM2Q8N436 756 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 SORCS1Q8WY21 1168 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 BAP1Q92560 729 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 P2RY11Q96G91 374 aa10.5□□□□□ -0.73
HERC1-212ENST00000561348 CFAP57Q96MR6 1250 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms