RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 GREM1O60565 184 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 SYPP08247 313 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 PRKCSHP14314 528 aaPredicted RBP11.25□□□□□ -0.61
TPM1-227ENST00000560970 TBXAS1P24557 533 aaPredicted RBP11.25□□□□□ -0.61
TPM1-227ENST00000560970 ATP5C1P36542 298 aaKnown RBP11.25□□□□□ -0.61
TPM1-227ENST00000560970 DGKGP49619 791 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 PGFP49763 221 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 MYL5Q02045 173 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 TCP11X2Q5H9J9 407 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 DPY19L2P1Q6NXN4 242 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 KLHDC10Q6PID8 442 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 TOGARAM2Q6ZUX3 1019 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 SLC41A1Q8IVJ1 513 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 AOPEPQ8N6M6 819 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 JAKMIP2Q96AA8 810 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 CYFIP2Q96F07 1278 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 ACOX2Q99424 681 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 HNRNPABQ99729 332 aaKnown RBP11.25□□□□□ -0.61
TPM1-227ENST00000560970 ZSWIM1Q9BR11 485 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 KLF16Q9BXK1 252 aaPredicted RBP11.25□□□□□ -0.61
TPM1-227ENST00000560970 SIX2Q9NPC8 291 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 SUSD2Q9UGT4 822 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 KLK13Q9UKR3 277 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 RAD54BQ9Y620 910 aa11.25□□□□□ -0.61
TPM1-227ENST00000560970 SYCE3A1L190 88 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 GTPBP10A4D1E9 387 aaKnown RBP11.24□□□□□ -0.61
TPM1-227ENST00000560970 PRRT4C9JH25 899 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 H0Y626 953 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 GFRA2O00451 464 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 NDUFS2O75306 463 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 TRIM16O95361 564 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 ZNF18P17022 549 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 PON1P27169 355 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 ZNF132P52740 706 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 GCNT1Q02742 428 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 KCNMA1Q12791 1236 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 CETN1Q12798 172 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 HNRNPDQ14103 355 aaKnown RBP11.24□□□□□ -0.61
TPM1-227ENST00000560970 STARD3Q14849 445 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 KRT31Q15323 416 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 EXOC3L4Q17RC7 722 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 ZNF423Q2M1K9 1284 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 VWA3BQ502W6 1294 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 ARHGAP17Q68EM7 881 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 TMEM270Q6UE05 265 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 KIAA1324Q6UXG2 1013 aaKnown RBP11.24□□□□□ -0.61
TPM1-227ENST00000560970 GBP6Q6ZN66 633 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 Q6ZNB5 142 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 TPGS1Q6ZTW0 290 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 TADA2BQ86TJ2 420 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 DEFB119Q8N690 84 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 RBBP8NLQ8NC74 664 aaPredicted RBP11.24□□□□□ -0.61
TPM1-227ENST00000560970 TFAP2BQ92481 460 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 MRGPRX1Q96LB2 322 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 HEXIM2Q96MH2 286 aaKnown RBP11.24□□□□□ -0.61
TPM1-227ENST00000560970 NDST4Q9H3R1 872 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 FAM124BQ9H5Z6 455 aaPredicted RBP11.24□□□□□ -0.61
TPM1-227ENST00000560970 CD93Q9NPY3 652 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 DNAAF2Q9NVR5 837 aaKnown RBP11.24□□□□□ -0.61
TPM1-227ENST00000560970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.24□□□□□ -0.613e-7■■■□□ 15.3
TPM1-227ENST00000560970 OSER1Q9NX31 292 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 CACNA2D2Q9NY47 1150 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 MSRB2Q9Y3D2 182 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 PCDHB4Q9Y5E5 795 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 CACNA1GO43497 2377 aa11.24□□□□□ -0.61
TPM1-227ENST00000560970 COL5A1P20908 1838 aaPredicted RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 A0A1W2PQH9 124 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 SRRM3A6NNA2 597 aaPredicted RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 BECN2A8MW95 431 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 MEI4A8MW99 385 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 TULP2O00295 520 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 MDM4O15151 490 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 TBX18O95935 607 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 GNSP15586 552 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 BRD2P25440 801 aaKnown RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 EEF1GP26641 437 aaKnown RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 RDXP35241 583 aaKnown RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 PSEN1P49768 467 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 YWHAEP62258 255 aaKnown RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 GRIK2Q13002 908 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 GOLGA7BQ2TAP0 167 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 PLEKHG6Q3KR16 790 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 C10orf120Q5SQS8 335 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 SYCP2LQ5T4T6 812 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 CCDC186Q7Z3E2 898 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 TTC39CQ8N584 583 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 OR2I1PQ8NGU4 316 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 BHMTQ93088 406 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 ERLEC1Q96DZ1 483 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 CDK5RAP1Q96SZ6 601 aaKnown RBP11.23□□□□□ -0.61
TPM1-227ENST00000560970 DNAI2Q9GZS0 605 aa11.23□□□□□ -0.61
TPM1-227ENST00000560970 SLC6A17Q9H1V8 727 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms