RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	CCDC15	Q0P6D6	951 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	MTA1	Q13330	715 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	SLC29A2	Q14542	456 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	ST3GAL2	Q16842	350 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	IZUMO4	Q1ZYL8	232 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	KIAA0753	Q2KHM9	967 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	LCE1F	Q5T754	118 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	DARS2	Q6PI48	645 aa	Known RBP	4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	CCDC149	Q6ZUS6	474 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	TRAPPC11	Q7Z392	1133 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	MSI2	Q96DH6	328 aa	Known RBP	4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	PRR11	Q96HE9	360 aa	Predicted RBP	4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	MSLNL	Q96KJ4	702 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	HIST1H2AA	Q96QV6	131 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	LRRC27	Q9C0I9	530 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	RMI1	Q9H9A7	625 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	AFF4	Q9UHB7	1163 aa	Known RBP	4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	INSL5	Q9Y5Q6	135 aa		4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.13	□□□□□ -1.75
SLTM-223	ENST00000560532	C16orf96	A6NNT2	1141 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	UGDH	O60701	494 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	SNX2	O60749	519 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	DDN	O94850	711 aa	Predicted RBP	4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	KLRC1	P26715	233 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	PEX2	P28328	305 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	DSCR9	P59020	149 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	EIF4A1	P60842	406 aa	Known RBP	4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	EGR4	Q05215	589 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	C3orf38	Q5JPI3	329 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	TRIL	Q7L0X0	811 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	SESTD1	Q86VW0	696 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	DGKH	Q86XP1	1220 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	WDR75	Q8IWA0	830 aa	Known RBP	4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	BCAS4	Q8TDM0	211 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	ELP5	Q8TE02	316 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	VPS45	Q9NRW7	570 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	SEMA5B	Q9P283	1151 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	SLC27A6	Q9Y2P4	619 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	PCDHGB1	Q9Y5G3	927 aa		4.12	□□□□□ -1.75
SLTM-223	ENST00000560532	TRBV5-3	A0A0A0MS03	114 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532		A0A0G2JK05	382 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	PODXL	O00592	558 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	LDB3	O75112	727 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	USP12	O75317	370 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	IL1R1	P14778	569 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	ST6GAL1	P15907	406 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	ZKSCAN1	P17029	563 aa	Predicted RBP	4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	TPH1	P17752	444 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	RPS6KB1	P23443	525 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	CPT1A	P50416	773 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	SLC12A2	P55011	1212 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	WDR5	P61964	334 aa	Known RBP	4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	RPS16	P62249	146 aa	Known RBP	4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	P3H2	Q8IVL5	708 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	ADGRF4	Q8IZF3	695 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	TIFA	Q96CG3	184 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	CINP	Q9BW66	212 aa	Predicted RBP	4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	BTBD1	Q9H0C5	482 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	DHX36	Q9H2U1	1008 aa	Known RBP	4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	CHPF2	Q9P2E5	772 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	SPATA31A1	Q5TZJ5	1347 aa		4.11	□□□□□ -1.75
SLTM-223	ENST00000560532	MGEA5	O60502	916 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	ATG13	O75143	517 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	MBP	P02686	304 aa	Predicted RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	TMEM225B	P0DP42	221 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	RPL17	P18621	184 aa	Known RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	ACVR2A	P27037	513 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	DDR1	Q08345	913 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	KCNAB1	Q14722	419 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	SLC4A8	Q2Y0W8	1093 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	INO80D	Q53TQ3	878 aa	Predicted RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	PRAMEF19	Q5SWL8	479 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	GRHL2	Q6ISB3	625 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	RBM44	Q6ZP01	1051 aa	Known RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	RTL10	Q7L3V2	364 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	MORC1	Q86VD1	984 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	ZNF668	Q96K58	619 aa	Predicted RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	C8orf48	Q96LL4	319 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	SAP30L	Q9HAJ7	183 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	MOV10	Q9HCE1	1003 aa	Known RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	FZD3	Q9NPG1	666 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	NCKIPSD	Q9NZQ3	722 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	WNT16	Q9UBV4	365 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	MID2	Q9UJV3	735 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	OGDHL	Q9ULD0	1010 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	MYO6	Q9UM54	1294 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	VPS4A	Q9UN37	437 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	EVPL	Q92817	2033 aa		4.1	□□□□□ -1.75
SLTM-223	ENST00000560532	AQP7P3	A6NL99	342 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	MAP4K4	O95819	1239 aa	Predicted RBP	4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	TXN	P10599	105 aa	Known RBP	4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	KCNJ4	P48050	445 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	KRTAP24-1	Q3LI83	254 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	PHKB	Q93100	1093 aa		4.09	□□□□□ -1.75
SLTM-223	ENST00000560532	TTC17	Q96AE7	1141 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms