RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
CCDC33-207ENST00000559243 WSB2Q9NYS7 404 aaPredicted RBP11.19□□□□□ -0.62
CCDC33-207ENST00000559243 TSPAN16Q9UKR8 245 aa11.19□□□□□ -0.62
CCDC33-207ENST00000559243 ZMIZ1Q9ULJ6 1067 aa11.19□□□□□ -0.62
CCDC33-207ENST00000559243 CLEC4EQ9ULY5 219 aa11.19□□□□□ -0.62
CCDC33-207ENST00000559243 COQ4Q9Y3A0 265 aa11.19□□□□□ -0.62
CCDC33-207ENST00000559243 AKAP13Q12802 2813 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 BPTFQ12830 3046 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 KNL1Q8NG31 2342 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 TMEM8BA6NDV4 472 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 TIMM44O43615 452 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 HYAL3O43820 417 aaPredicted RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 TSPAN3O60637 253 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 ACADMP11310 421 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 CD59P13987 128 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 MAOBP27338 520 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 OXTRP30559 389 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 RDXP35241 583 aaKnown RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 HARS2P49590 506 aaKnown RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 FKBP3Q00688 224 aaKnown RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 LRMPQ12912 555 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 SLC14A1Q13336 389 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 HNRNPDQ14103 355 aaKnown RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 TRIP4Q15650 581 aaPredicted RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 MPPE1Q53F39 396 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 COBLL1Q53SF7 1204 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 ZNF658Q5TYW1 1059 aaPredicted RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 TMPRSS6Q8IU80 811 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 FMNL3Q8IVF7 1028 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 FAM217AQ8IXS0 508 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 SIX6OS1Q8N1H7 587 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 KDF1Q8NAX2 398 aaPredicted RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 PRCCQ92733 491 aaPredicted RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 GSDMAQ96QA5 445 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 GPR174Q9BXC1 333 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 TMEM121BQ9BXQ6 578 aaPredicted RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 USP36Q9P275 1121 aaKnown RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 HBS1LQ9Y450 684 aaKnown RBP11.18□□□□□ -0.62
CCDC33-207ENST00000559243 CKAP5Q14008 2032 aa11.18□□□□□ -0.62
CCDC33-207ENST00000559243 HELZ2Q9BYK8 2649 aaKnown RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 GOLGA6L4A6NEF3 574 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 KCNJ18B7U540 433 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 H0Y626 953 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 SMC2O95347 1197 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 TRIM16O95361 564 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 EPHX1P07099 455 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 VDRP11473 427 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 NCAM1P13591 858 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 TBXAS1P24557 533 aaPredicted RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 TPMTP51580 245 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 COPAP53621 1224 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 PMS1P54277 932 aaKnown RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 ZNF445P59923 1031 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 FAM193AP78312 1265 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 ADIGQ0VDE8 80 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 BSPRYQ5W0U4 402 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 TMEM215Q68D42 235 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 SERPINA13PQ6UXR4 307 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 ZC3H3Q8IXZ2 948 aaKnown RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 FMR1NBQ8N0W7 255 aaPredicted RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 RBBP8NLQ8NC74 664 aaPredicted RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 CADM4Q8NFZ8 388 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 UBA3Q8TBC4 463 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 SORCS1Q8WY21 1168 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 DNASE2BQ8WZ79 361 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 EDEM1Q92611 657 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 GATA6Q92908 595 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 TMA16Q96EY4 203 aaKnown RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 ZDHHC5Q9C0B5 715 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 MIR1-1HGQ9H1L0 117 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 ABCC13Q9NSE7 274 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 ARMCX3Q9UH62 379 aaPredicted RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 SFMBT1Q9UHJ3 866 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 NFE2L3Q9Y4A8 694 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 NEUROG3Q9Y4Z2 214 aa11.17□□□□□ -0.62
CCDC33-207ENST00000559243 SMG1Q96Q15 3661 aaKnown RBP11.17□□□□□ -0.62
CCDC33-207ENST00000559243 A0A1B0GTW7 788 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 TRIM49BA6NDI0 452 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 YJEFN3A6XGL0 299 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 METTL12A8MUP2 240 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 E7ENQ6 273 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 O00370 1275 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 SH3BP5O60239 455 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 GJB3O75712 270 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 SETSIPP0DME0 302 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 HLA-EP13747 358 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 LCP1P13796 627 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 PRKCHP24723 683 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 HOXD9P28356 352 aaPredicted RBP11.16□□□□□ -0.62
CCDC33-207ENST00000559243 LRRC63Q05C16 580 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 GRIK2Q13002 908 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 NUMA1Q14980 2115 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 ADGRF1Q5T601 910 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 DCAF12L1Q5VU92 463 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 TMEM270Q6UE05 265 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 CACUL1Q86Y37 369 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 SCML4Q8N228 414 aa11.16□□□□□ -0.62
CCDC33-207ENST00000559243 ZCCHC9Q8N567 271 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms