RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 STOML2Q9UJZ1 356 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 CA14Q9ULX7 337 aa11.33□□□□□ -0.6
TPM1-217ENST00000559108 EPN1Q9Y6I3 576 aaPredicted RBP11.33□□□□□ -0.6
TPM1-217ENST00000559108 ATG2BQ96BY7 2078 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 F5P12259 2224 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 EIF3CLB5ME19 914 aaKnown RBP11.32□□□□□ -0.6
TPM1-217ENST00000559108 DCXO43602 365 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 TSPAN3O60637 253 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 PAGE1O75459 146 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 MOCS2O96007 188 aaPredicted RBP11.32□□□□□ -0.6
TPM1-217ENST00000559108 H2AFZP0C0S5 128 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 TMEM253P0C7T8 217 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 CHRM1P11229 460 aaPredicted RBP11.32□□□□□ -0.6
TPM1-217ENST00000559108 GJA4P35212 333 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 OPRD1P41143 372 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 IFNAR2P48551 515 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 ZNF143P52747 638 aaPredicted RBP11.32□□□□□ -0.6
TPM1-217ENST00000559108 COG7P83436 770 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 RING1Q06587 406 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 RUNX3Q13761 415 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 DHCR24Q15392 516 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 FYB2Q5VWT5 728 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
TPM1-217ENST00000559108 RFWD3Q6PCD5 774 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 H2AFVQ71UI9 128 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 TADA2BQ86TJ2 420 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 VPS36Q86VN1 386 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 DDX42Q86XP3 938 aaKnown RBP eCLIP11.32□□□□□ -0.6
TPM1-217ENST00000559108 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 ZNF683Q8IZ20 524 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 PHTF2Q8N3S3 785 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 WFDC5Q8TCV5 224 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 EIF3CQ99613 913 aaKnown RBP11.32□□□□□ -0.6
TPM1-217ENST00000559108 LACRTQ9GZZ8 138 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 ECT2Q9H8V3 914 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 TRPV5Q9NQA5 729 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 PARVAQ9NVD7 372 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 ARHGEF38Q9NXL2 777 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 TRIM10Q9UDY6 481 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 NEU3Q9UQ49 428 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 MTF2Q9Y483 593 aaPredicted RBP11.32□□□□□ -0.6
TPM1-217ENST00000559108 CHD5Q8TDI0 1954 aa11.32□□□□□ -0.6
TPM1-217ENST00000559108 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 ACSL4O60488 711 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 MYBL1P10243 752 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 SDC4P31431 198 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 CTHP32929 405 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 RDXP35241 583 aaKnown RBP11.31□□□□□ -0.6
TPM1-217ENST00000559108 SLC6A11P48066 632 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 SNX16P57768 344 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 DEUP1Q05D60 604 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 PPP2R5DQ14738 602 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 PDGFRLQ15198 375 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 CA9Q16790 459 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 TSR1Q2NL82 804 aaKnown RBP11.31□□□□□ -0.6
TPM1-217ENST00000559108 SLC44A4Q53GD3 710 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 MS4A13Q5J8X5 152 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 RAP1GAP2Q684P5 730 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 CWF19L1Q69YN2 538 aaKnown RBP11.31□□□□□ -0.6
TPM1-217ENST00000559108 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 TPGS1Q6ZTW0 290 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 CIR1Q86X95 450 aaPredicted RBP11.31□□□□□ -0.6
TPM1-217ENST00000559108 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 YAF2Q8IY57 180 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 CCDC170Q8IYT3 715 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 PYROXD2Q8N2H3 581 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 EDAQ92838 391 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 IRF7Q92985 503 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 BHMTQ93088 406 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 IGSF8Q969P0 613 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 ZNF830Q96NB3 372 aaPredicted RBP11.31□□□□□ -0.6
TPM1-217ENST00000559108 CNPY3Q9BT09 278 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 FOXQ1Q9C009 403 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 GOLPH3Q9H4A6 298 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 ARHGEF3Q9NR81 526 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 SPHK2Q9NRA0 654 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 PLK2Q9NYY3 685 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 HCN2Q9UL51 889 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 STAP1Q9ULZ2 295 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 PCDHA13Q9Y5I0 950 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 PIAS3Q9Y6X2 628 aa11.31□□□□□ -0.6
TPM1-217ENST00000559108 NYNRINQ9P2P1 1898 aaKnown RBP11.31□□□□□ -0.6
TPM1-217ENST00000559108 FAM86C2PA6NEL3 165 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 SPECC1L-ADORA2AF8WAN1 911 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 TNFRSF10AO00220 468 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 LRCH4O75427 683 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 MTA2O94776 668 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 PENKP01210 267 aaPredicted RBP11.3□□□□□ -0.6
TPM1-217ENST00000559108 PSMA2P25787 234 aa11.3□□□□□ -0.6
TPM1-217ENST00000559108 IL1R2P27930 398 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms