RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 KLF16Q9BXK1 252 aaPredicted RBP15.43■□□□□ 0.06
VPS18-202ENST00000558474 DCLK3Q9C098 648 aa15.43■□□□□ 0.06
VPS18-202ENST00000558474 RNF38Q9H0F5 515 aa15.43■□□□□ 0.06
VPS18-202ENST00000558474 IGFLR1Q9H665 355 aa15.43■□□□□ 0.06
VPS18-202ENST00000558474 RETREG1Q9H6L5 497 aa15.43■□□□□ 0.06
VPS18-202ENST00000558474 NUDT5Q9UKK9 219 aa15.43■□□□□ 0.06
VPS18-202ENST00000558474 NOTCH4Q99466 2003 aa15.43■□□□□ 0.06
VPS18-202ENST00000558474 RANBP2P49792 3224 aaKnown RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 MSI1O43347 362 aaKnown RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 MOSPD3O75425 235 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 TJP3O95049 919 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 MBL2P11226 248 aaPredicted RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 TCF3P15923 654 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 ZFXP17010 805 aaPredicted RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 ARL4AP40617 200 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 CDKN2BP42772 138 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 HARS2P49590 506 aaKnown RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 TUBB4BP68371 445 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 SEMA3BQ13214 749 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 TFDP2Q14188 446 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 DPYSL3Q14195 570 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 TXNDC8Q6A555 127 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 MFSD7Q6UXD7 560 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 GRASPQ7Z6J2 395 aaPredicted RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 SLC13A5Q86YT5 568 aaPredicted RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 MIB1Q86YT6 1006 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 CCDC50Q8IVM0 306 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 TSC1Q92574 1164 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 EPAS1Q99814 870 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 OSBPL8Q9BZF1 889 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 DHX35Q9H5Z1 703 aaKnown RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 PCDH18Q9HCL0 1135 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 TRPC7Q9HCX4 862 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 HCFC1R1Q9NWW0 138 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 MTMR10Q9NXD2 777 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 ZNF510Q9Y2H8 683 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 C2orf16Q68DN1 1984 aa15.42■□□□□ 0.06
VPS18-202ENST00000558474 NUP210Q8TEM1 1887 aaPredicted RBP15.42■□□□□ 0.06
VPS18-202ENST00000558474 hCG_1818297A0A087WSY0 165 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 H3BRJ5 948 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 ZNF185O15231 689 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 GTF2F1P35269 517 aaKnown RBP eCLIP15.41■□□□□ 0.06
VPS18-202ENST00000558474 CCR2P41597 374 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 SLC11A2P49281 568 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 MLLT6P55198 1093 aaPredicted RBP15.41■□□□□ 0.06
VPS18-202ENST00000558474 CYP4F8P98187 520 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 ZNF211Q13398 564 aaPredicted RBP15.41■□□□□ 0.06
VPS18-202ENST00000558474 TMC5Q6UXY8 1006 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 MAB21L3Q8N8X9 362 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 RNF25Q96BH1 459 aaPredicted RBP15.41■□□□□ 0.06
VPS18-202ENST00000558474 DDX50Q9BQ39 737 aaKnown RBP15.41■□□□□ 0.06
VPS18-202ENST00000558474 MAK16Q9BXY0 300 aaKnown RBP15.41■□□□□ 0.06
VPS18-202ENST00000558474 FRMD8P1Q9BZ68 369 aaPredicted RBP15.41■□□□□ 0.06
VPS18-202ENST00000558474 ADAM7Q9H2U9 754 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 HOMER3Q9NSC5 361 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 DONSONQ9NYP3 566 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 OR12D3Q9UGF7 316 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 ARHGAP26Q9UNA1 814 aa15.41■□□□□ 0.06
VPS18-202ENST00000558474 MRPS23Q9Y3D9 190 aaKnown RBP15.41■□□□□ 0.06
VPS18-202ENST00000558474 GOLGA6L10A0A0M3HER8 536 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 CCDC188H7C350 402 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 PAGE1O75459 146 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 STC2O76061 302 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 FGGP02679 453 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 CKMP06732 381 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 IL4RP24394 825 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 AVPR1AP37288 418 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 KLF1Q13351 362 aaPredicted RBP15.4■□□□□ 0.06
VPS18-202ENST00000558474 TEAD2Q15562 447 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 CA9Q16790 459 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 LONRF2Q1L5Z9 754 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 ANKRD20A8PQ5CZ79 823 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 RARS2Q5T160 578 aaKnown RBP15.4■□□□□ 0.06
VPS18-202ENST00000558474 GPR158Q5T848 1215 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 CES5AQ6NT32 575 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 SYCE2Q6PIF2 218 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 CMTM8Q8IZV2 173 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 ARL14EPQ8N8R7 260 aaPredicted RBP15.4■□□□□ 0.06
VPS18-202ENST00000558474 TTC13Q8NBP0 860 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 PABPC5Q96DU9 382 aaKnown RBP15.4■□□□□ 0.06
VPS18-202ENST00000558474 ZFRQ96KR1 1074 aaKnown RBP15.4■□□□□ 0.06
VPS18-202ENST00000558474 CAPZA3Q96KX2 299 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 RNF157Q96PX1 679 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 KCTD15Q96SI1 283 aaPredicted RBP15.4■□□□□ 0.06
VPS18-202ENST00000558474 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 SLC46A2Q9BY10 475 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 PPARGC1AQ9UBK2 798 aaKnown RBP15.4■□□□□ 0.06
VPS18-202ENST00000558474 STOML2Q9UJZ1 356 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 MYO7AQ13402 2215 aa15.4■□□□□ 0.06
VPS18-202ENST00000558474 PI4K2BG5E9Z4 385 aa15.39■□□□□ 0.05
VPS18-202ENST00000558474 I6L893 689 aaPredicted RBP15.39■□□□□ 0.05
VPS18-202ENST00000558474 SOX1O00570 391 aaPredicted RBP15.39■□□□□ 0.05
VPS18-202ENST00000558474 FGF10O15520 208 aaPredicted RBP15.39■□□□□ 0.05
VPS18-202ENST00000558474 LINC01565O15544 149 aa15.39■□□□□ 0.05
VPS18-202ENST00000558474 ACSL4O60488 711 aa15.39■□□□□ 0.05
VPS18-202ENST00000558474 HOXC13P31276 330 aa15.39■□□□□ 0.05
VPS18-202ENST00000558474 RBM10P98175 930 aaKnown RBP15.39■□□□□ 0.05
VPS18-202ENST00000558474 ADGRE1Q14246 886 aa15.39■□□□□ 0.05
VPS18-202ENST00000558474 SLC5A9Q2M3M2 681 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms