RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 GALNT4Q8N4A0 578 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 WDTC1Q8N5D0 677 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 FAM136AQ96C01 138 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 ELMO2Q96JJ3 720 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 PCYT2Q99447 389 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 IPO11Q9UI26 975 aaKnown RBP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 TSR3Q9UJK0 312 aaKnown RBP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 CXCL11O14625 94 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 MT-CO1P00395 513 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 HMBSP08397 361 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 GRIA1P42261 906 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 GPD2P43304 727 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 COG7P83436 770 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 MED21Q13503 144 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 KLC3Q6P597 504 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 NAT8LQ8N9F0 302 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 ICA1LQ8NDH6 482 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 FNIP1Q8TF40 1166 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 NXF3Q9H4D5 531 aaKnown RBP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 LRRC40Q9H9A6 602 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 EFR3BQ9Y2G0 817 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 CDY2AQ9Y6F7 541 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 CDY1Q9Y6F8 540 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 RRN3P2A6NIE6 340 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PIGRP01833 764 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PROCP04070 461 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 GNAT1P11488 350 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 GRIK1P39086 918 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PRAMEP78395 509 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 MBTD1Q05BQ5 628 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 SLC34A1Q06495 639 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 CMC1Q7Z7K0 106 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 GPC2Q8N158 579 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 CLEC4CQ8WTT0 213 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 FGD4Q96M96 766 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 NUDT5Q9UKK9 219 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 VANGL2Q9ULK5 521 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 CLUHO75153 1309 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 TRDMT1O14717 391 aaKnown RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PAMP19021 973 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 POU6F1Q14863 301 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 LRRC74BQ6ZQY2 392 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 TDRPQ86YL5 185 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 ATPAF2Q8N5M1 289 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PCDH19Q8TAB3 1148 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 SDCBP2Q9H190 292 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PDZD7Q9H5P4 517 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 CYP4F12Q9HCS2 524 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 CHST12Q9NRB3 414 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PPP2R3BQ9Y5P8 575 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 CASTOR2A6NHX0 329 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 SKIV2L2P42285 1042 aaKnown RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 MPP3Q13368 585 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 MYLK4Q86YV6 388 aaPredicted RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 IGDCC3Q8IVU1 814 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 TEKT4Q8WW24 435 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 PYDC1Q8WXC3 89 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 XPNPEP3Q9NQH7 507 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 SETSIPP0DME0 302 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 RBBP5Q15291 538 aaKnown RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 RAB6CQ53S08 254 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 LCLAT1Q6UWP7 414 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 RAB6CQ9H0N0 254 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 DPEP3Q9H4B8 488 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 DDX43Q9NXZ2 648 aaKnown RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 SLC17A6Q9P2U8 582 aa15.9■□□□□ 0.14
AP4E1-202ENST00000558439 RUVBL2Q9Y230 463 aaKnown RBP15.9■□□□□ 0.14
AP4E1-202ENST00000558439 A0A096LPK6 155 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 C2CD4BA6NLJ0 364 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PSMG1O95456 288 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 KPNA2P52292 529 aaKnown RBP15.89■□□□□ 0.13
AP4E1-202ENST00000558439 RABGGTBP53611 331 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 TSPY1Q01534 308 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PDPK2PQ6A1A2 396 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 RFWD3Q6PCD5 774 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 UNC5BQ8IZJ1 945 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 BANPQ8N9N5 519 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PIWIL1Q96J94 861 aaKnown RBP15.89■□□□□ 0.13
AP4E1-202ENST00000558439 ILKAPQ9H0C8 392 aaPredicted RBP15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PPME1Q9Y570 386 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 STYXL1Q9Y6J8 313 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 STRCQ7RTU9 1775 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PRR5-ARHGAP8B1AHC4 643 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PDHXO00330 501 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 GSC2O15499 205 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 GMNNO75496 209 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 EDN1P05305 212 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 GP5P40197 560 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 ARHGAP8P85298 464 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 ZNF252P-AS1Q0IIN9 211 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 MAP7Q14244 749 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 KHDC1Q4VXA5 237 aaKnown RBP15.89■□□□□ 0.13
AP4E1-202ENST00000558439 WSCD1Q658N2 575 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PDCD6IPQ8WUM4 868 aaKnown RBP15.89■□□□□ 0.13
AP4E1-202ENST00000558439 FZD8Q9H461 694 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 PFDN4Q9NQP4 134 aa15.89■□□□□ 0.13
AP4E1-202ENST00000558439 A0A0A0MRY4 1105 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms