RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 THAP1Q9NVV9 213 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 MRPL39Q9NYK5 338 aaKnown RBP11.6□□□□□ -0.55
INO80-205ENST00000558357 STK39Q9UEW8 545 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 ANKRD6Q9Y2G4 727 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 CLOCKO15516 846 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 RIPK2O43353 540 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 NDUFB5O43674 189 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 RPLP2P05387 115 aaKnown RBP11.6□□□□□ -0.55
INO80-205ENST00000558357 PAICSP22234 425 aaKnown RBP11.6□□□□□ -0.55
INO80-205ENST00000558357 RPS12P25398 132 aaKnown RBP11.6□□□□□ -0.55
INO80-205ENST00000558357 CRABP2P29373 138 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 GRK4P32298 578 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 STX4Q12846 297 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 CTXN3Q4LDR2 81 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 ATAD3BQ5T9A4 648 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 PCNX4Q63HM2 1172 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 PIF1Q9H611 641 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 MYOZ2Q9NPC6 264 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 SNX8Q9Y5X2 465 aa11.6□□□□□ -0.55
INO80-205ENST00000558357 RAD51BO15315 384 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 PDE9AO76083 593 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 CAMTA2O94983 1202 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 GP5P40197 560 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 PTPN11Q06124 597 aaPredicted RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 MTA1Q13330 715 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 MYBPC2Q14324 1141 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 PLCL1Q15111 1095 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 PTPAQ15257 358 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 DGUOKQ16854 277 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 ANKRD13AQ8IZ07 590 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 OMA1Q96E52 524 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 COQ7Q99807 217 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 MMADHCQ9H3L0 296 aaPredicted RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 RAD21L1Q9H4I0 556 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 OSGEPQ9NPF4 335 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 CISHQ9NSE2 258 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 ADPRHL2Q9NX46 363 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 SF3B1O75533 1304 aaKnown RBP eCLIP11.59□□□□□ -0.554e-7■■■■■ 86.2
INO80-205ENST00000558357 C1orf232A0A0U1RR37 186 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 PGAM1P18669 254 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 IL12RB1P42701 662 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 STARD3Q14849 445 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 ERMARDQ5T6L9 678 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 ZNF57Q68EA5 555 aaPredicted RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 ZNF571Q7Z3V5 609 aaPredicted RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 ENKURQ8TC29 256 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 OXNAD1Q96HP4 312 aaPredicted RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 APOPT1Q96IL0 206 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 CCDC3Q9BQI4 270 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 TMEM39BQ9GZU3 492 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 NMRAL1Q9HBL8 299 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 CCDC154A6NI56 674 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 PARNO95453 639 aaKnown RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 RAP1GAPP47736 663 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 CSNK2BP67870 215 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 ATP1A4Q13733 1029 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 FASTKQ14296 549 aaKnown RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 KRT73Q86Y46 540 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 SPIRE2Q8WWL2 714 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 SH3BP4Q9P0V3 963 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 NFICP08651 508 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 MYL12AP19105 171 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 SREBF1P36956 1147 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 TROAPQ12815 778 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 SPANXN3Q5MJ09 141 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 CDC73Q6P1J9 531 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 SLC47A2Q86VL8 602 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 FBXO39Q8N4B4 442 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 MPP4Q96JB8 637 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 TBCBQ99426 244 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 CPNE1Q99829 537 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 SLITRK2Q9H156 845 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 SEMA6BQ9H3T3 888 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 KBTBD4Q9NVX7 518 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 UBAP1Q9NZ09 502 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
INO80-205ENST00000558357 VAV3Q9UKW4 847 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
INO80-205ENST00000558357 PSMD12O00232 456 aaPredicted RBP11.58□□□□□ -0.55
INO80-205ENST00000558357 CBX4O00257 560 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 INPP4BO15327 924 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 MARC1Q5VT66 337 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 FNDC5Q8NAU1 212 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 ACTL9Q8TC94 416 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 DCLK3Q9C098 648 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 RRN3Q9NYV6 651 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 STON1Q9Y6Q2 735 aa11.58□□□□□ -0.55
INO80-205ENST00000558357 A0A0G2JLW4 131 aa11.58□□□□□ -0.56
INO80-205ENST00000558357 FCHO1O14526 889 aa11.58□□□□□ -0.56
INO80-205ENST00000558357 ENDOD1O94919 500 aa11.58□□□□□ -0.56
INO80-205ENST00000558357 THP07101 528 aa11.58□□□□□ -0.56
INO80-205ENST00000558357 SERPINF2P08697 491 aa11.58□□□□□ -0.56
INO80-205ENST00000558357 MSH3P20585 1137 aa11.58□□□□□ -0.56
INO80-205ENST00000558357 ALDH9A1P49189 494 aa11.58□□□□□ -0.56
INO80-205ENST00000558357 CLCN3P51790 818 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms