RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 STK38LQ9Y2H1 464 aa5.68□□□□□ -1.5
GABPB1-207ENST00000558335 PARP14Q460N5 1801 aa5.68□□□□□ -1.5
GABPB1-207ENST00000558335 BRWD3Q6RI45 1802 aa5.68□□□□□ -1.5
GABPB1-207ENST00000558335 DOCK5Q9H7D0 1870 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 IGKV6D-21A0A0A0MT36 114 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SH3PXD2BA1X283 911 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 NOTOA8MTQ0 251 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 HACD1B0YJ81 288 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 KBTBD13C9JR72 458 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 H0Y3Z8 333 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 COPEO14579 308 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CASQ2O14958 399 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MUSKO15146 869 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 TP73O15350 636 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 GYG2O15488 501 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 HNRNPRO43390 633 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PRPSAP2O60256 369 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MAGEC1O60732 1142 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MAFO75444 373 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 BAIAP3O94812 1187 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 KLHL2O95198 593 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ZBED1O96006 694 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 APBA3O96018 575 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CCNE2O96020 404 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 KRT16P08779 473 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 HOXC6P09630 235 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MLNP12872 115 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CCDC130P13994 396 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CTRB1P17538 263 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 GNAZP19086 355 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CD58P19256 250 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 IBSPP21815 317 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 KDELR1P24390 212 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 DNAJB2P25686 324 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SCNN1AP37088 669 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 HADHAP40939 763 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 GARSP41250 739 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MAGEA6P43360 314 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 GABRB2P47870 512 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ZNF135P52742 658 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CACNA2D1P54289 1103 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PRKAA2P54646 552 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ZNF280AP59817 542 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 EIF3EP60228 445 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 TGFB2P61812 414 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 S100A12P80511 92 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CNTN2Q02246 1040 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 RELAQ04206 551 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SLC18A2Q05940 514 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 GALNT1Q10472 559 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 IRF5Q13568 498 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 BAATQ14032 418 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PCBP1Q15365 356 aaKnown RBP eCLIP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 TRIP13Q15645 432 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ZNF699Q32M78 642 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 TRMT5Q32P41 509 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MTERF2Q49AM1 385 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 LIN52Q52LA3 116 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CCNJQ5T5M9 372 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PLA2G4FQ68DD2 849 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 TRIM68Q6AZZ1 485 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CTRB2Q6GPI1 263 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SNRNP48Q6IEG0 339 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PPP4R4Q6NUP7 873 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SLC39A4Q6P5W5 647 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MPZL3Q6UWV2 235 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 MFSD7Q6UXD7 560 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 KYAT3Q6YP21 454 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 AGMOQ6ZNB7 445 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 DBX2Q6ZNG2 339 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PDZD4Q76G19 769 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PLPPR4Q7Z2D5 763 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CYP2U1Q7Z449 544 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 NET1Q7Z628 596 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ZNF467Q7Z7K2 595 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PATL1Q86TB9 770 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SPATA24Q86W54 205 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 LONP2Q86WA8 852 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 LRRC6Q86X45 466 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 DNAAF5Q86Y56 855 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CRLF3Q8IUI8 442 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PSTKQ8IV42 348 aaKnown RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 UBR7Q8N806 425 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 LSMEM1Q8N8F7 131 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 NAT8LQ8N9F0 302 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 BANPQ8N9N5 519 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 TERB1Q8NA31 727 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CMASQ8NFW8 434 aaPredicted RBP5.67□□□□□ -1.5
GABPB1-207ENST00000558335 CALML6Q8TD86 181 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 C10orf82Q8WW14 230 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SEPT1Q8WYJ6 367 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ATG4AQ8WYN0 398 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 JADE3Q92613 823 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 SGCDQ92629 289 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 PEX13Q92968 403 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 EME1Q96AY2 570 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 ASIC4Q96FT7 647 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 BTBD6Q96KE9 485 aa5.67□□□□□ -1.5
GABPB1-207ENST00000558335 COX4I2Q96KJ9 171 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms