RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PRKCHP24723 683 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 SLC8A3P57103 927 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 PDE4CQ08493 712 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 GRIK2Q13002 908 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 DCAF12L1Q5VU92 463 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 SMYD4Q8IYR2 804 aaPredicted RBP16.68■□□□□ 0.26
SCFD1-224ENST00000557713 SORCS1Q8WY21 1168 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 PRCCQ92733 491 aaPredicted RBP16.68■□□□□ 0.26
SCFD1-224ENST00000557713 STOML2Q9UJZ1 356 aa16.68■□□□□ 0.26
SCFD1-224ENST00000557713 CACNA1EQ15878 2313 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 MEI4A8MW99 385 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 XPO1O14980 1071 aaKnown RBP16.67■□□□□ 0.26
SCFD1-224ENST00000557713 C7P10643 843 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 EPB41P11171 864 aaKnown RBP16.67■□□□□ 0.26
SCFD1-224ENST00000557713 GOLGA7BQ2TAP0 167 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 MPPE1Q53F39 396 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 FMNL3Q8IVF7 1028 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 NAXDQ8IW45 347 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 C1orf216Q8TAB5 229 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 CIPCQ9C0C6 399 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 SCAND2PQ9GZW5 306 aaPredicted RBP16.67■□□□□ 0.26
SCFD1-224ENST00000557713 OLA1Q9NTK5 396 aaKnown RBP16.67■□□□□ 0.26
SCFD1-224ENST00000557713 TSPAN16Q9UKR8 245 aa16.67■□□□□ 0.26
SCFD1-224ENST00000557713 HBS1LQ9Y450 684 aaKnown RBP16.67■□□□□ 0.26
SCFD1-224ENST00000557713 TSPAN3O60637 253 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 CBFA2T3O75081 653 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 EPHX1P07099 455 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 HOXD9P28356 352 aaPredicted RBP16.66■□□□□ 0.26
SCFD1-224ENST00000557713 HLA-FP30511 346 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 HARS2P49590 506 aaKnown RBP16.66■□□□□ 0.26
SCFD1-224ENST00000557713 BCAT1P54687 386 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 BNC1Q01954 994 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 CAMK2GQ13555 558 aaPredicted RBP16.66■□□□□ 0.26
SCFD1-224ENST00000557713 CUL2Q13617 745 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 BSPRYQ5W0U4 402 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 KIAA0907Q7Z7F0 614 aaPredicted RBP16.66■□□□□ 0.26
SCFD1-224ENST00000557713 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
SCFD1-224ENST00000557713 ZCCHC9Q8N567 271 aaKnown RBP16.66■□□□□ 0.26
SCFD1-224ENST00000557713 ADAMTS14Q8WXS8 1223 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 MIR1-1HGQ9H1L0 117 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 LRRC4Q9HBW1 653 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 SFMBT1Q9UHJ3 866 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 PCDHB9Q9Y5E1 797 aa16.66■□□□□ 0.26
SCFD1-224ENST00000557713 YJEFN3A6XGL0 299 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 E7ENQ6 273 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 TAF4O00268 1085 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 BCAT2O15382 392 aaPredicted RBP16.65■□□□□ 0.26
SCFD1-224ENST00000557713 ACADMP11310 421 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 PRCPP42785 496 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 ADIGQ0VDE8 80 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 BST2Q10589 180 aaKnown RBP16.65■□□□□ 0.26
SCFD1-224ENST00000557713 SGO2Q562F6 1265 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 ADGRF1Q5T601 910 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 SERPINA13PQ6UXR4 307 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 SCML4Q8N228 414 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 UBR7Q8N806 425 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 OR2T3Q8NH03 318 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 UBA3Q8TBC4 463 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 KCTD13Q8WZ19 329 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 EDEM1Q92611 657 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 TMA16Q96EY4 203 aaKnown RBP16.65■□□□□ 0.26
SCFD1-224ENST00000557713 PCED1AQ9H1Q7 454 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 TMEM245Q9H330 911 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 IL21RQ9HBE5 538 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 ABCC13Q9NSE7 274 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 HESX1Q9UBX0 185 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 EIF2B4Q9UI10 523 aaKnown RBP16.65■□□□□ 0.26
SCFD1-224ENST00000557713 PCOLCE2Q9UKZ9 415 aa16.65■□□□□ 0.26
SCFD1-224ENST00000557713 CKAP5Q14008 2032 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 SLC16A3O15427 465 aaKnown RBP16.64■□□□□ 0.25
SCFD1-224ENST00000557713 LATS1O95835 1130 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 FTH1P19P0C7X4 201 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 ZNF883P0CG24 379 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 VDRP11473 427 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 HLA-EP13747 358 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 ZNF445P59923 1031 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 ARID5AQ03989 594 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 PNOCQ13519 176 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 PKDCCQ504Y2 493 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 COBLL1Q53SF7 1204 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 TCERG1LQ5VWI1 586 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 ANKRD40Q6AI12 368 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 DBX2Q6ZNG2 339 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 GLRX5Q86SX6 157 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 ADIPOR2Q86V24 386 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCFD1-224ENST00000557713 PNPLA1Q8N8W4 532 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 WFIKKN2Q8TEU8 576 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 RNF139Q8WU17 664 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 IPO9Q96P70 1041 aaKnown RBP16.64■□□□□ 0.25
SCFD1-224ENST00000557713 GAREM1Q9H706 876 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 KIAA1257Q9ULG3 409 aa16.64■□□□□ 0.25
SCFD1-224ENST00000557713 O00370 1275 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 GABBR2O75899 941 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 CD19P15391 556 aa16.63■□□□□ 0.25
SCFD1-224ENST00000557713 DAOAP59103 153 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms