RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 KIRREL2Q6UWL6 708 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 C16orf89Q6UX73 402 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 SYT13Q7L8C5 426 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 RASGRP2Q7LDG7 609 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 LRRTM4Q86VH4 590 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 LINC01465Q8N7H1 131 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 SIMC1Q8NDZ2 872 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 MAELQ96JY0 434 aaKnown RBP4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 COG8Q96MW5 612 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 SORCS2Q96PQ0 1159 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 MAF1Q9H063 256 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 NOD2Q9HC29 1040 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 FZD4Q9ULV1 537 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 LZTS1Q9Y250 596 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 PCDHB2Q9Y5E7 798 aa4.92□□□□□ -1.62
EFCAB11-213ENST00000557685 OVOL3O00110 214 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 FOXN1O15353 648 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 SEPT4O43236 478 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 PRAMEF2O60811 474 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 FZD7O75084 574 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 RHOBTB3O94955 611 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 AGR2O95994 175 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 MBPP02686 304 aaPredicted RBP4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 GCP02774 474 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 KRT4P19013 534 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 CD53P19397 219 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 RXRAP19793 462 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 DRD4P21917 467 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 GALNSP34059 522 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 GDF5P43026 501 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 JAK3P52333 1124 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 COPB1P53618 953 aaKnown RBP4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 INTS11Q5TA45 600 aaKnown RBP4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 WDR93Q6P2C0 686 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 SLC29A4Q7RTT9 530 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 CPOQ8IVL8 374 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 TERB1Q8NA31 727 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 CAGE1Q8TC20 777 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 NEU4Q8WWR8 484 aaPredicted RBP4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 ASB12Q8WXK4 309 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 KAZALD1Q96I82 304 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 BBC3Q96PG8 261 aaPredicted RBP4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 TIMP4Q99727 224 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 CIPCQ9C0C6 399 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 CDCP1Q9H5V8 836 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 ABHD10Q9NUJ1 306 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 SEMA5BQ9P283 1151 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 PI4KBQ9UBF8 816 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 SLC13A4Q9UKG4 626 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 RAB21Q9UL25 225 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 SLC12A4Q9UP95 1085 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 PCDHA10Q9Y5I2 948 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 ENTPD2Q9Y5L3 495 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 SPATA31A1Q5TZJ5 1347 aa4.91□□□□□ -1.62
EFCAB11-213ENST00000557685 TBC1D3DA0A087WVF3 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3IA0A087WXS9 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3BA6NDS4 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TTC34A8MYJ7 566 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 H3BNC9 293 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 ZNF213O14771 459 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 HOXC11O43248 304 aaPredicted RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 HNRNPRO43390 633 aaKnown RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 MT-CO3P00414 261 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 POLBP06746 335 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 CYP21A2P08686 494 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3HP0C7X1 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 C6P13671 934 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 APEHP13798 732 aaKnown RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TACR2P21452 398 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 FPR3P25089 353 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 CNTFP26441 200 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 GRK5P34947 590 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 PLA2G5P39877 138 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 CACNA2D1P54289 1103 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 FOXL2P58012 376 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 FAM3BP58499 235 aaPredicted RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 RAE1P78406 368 aaKnown RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 HOXA4Q00056 320 aaPredicted RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 UBE3AQ05086 875 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBX2Q13207 712 aaPredicted RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 SLC12A1Q13621 1099 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 ERCC6LQ2NKX8 1250 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 CTXN3Q4LDR2 81 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 JAKMIP3Q5VZ66 844 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 CEP85Q6P2H3 762 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 BCDIN3DQ7Z5W3 292 aaKnown RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 RASAL3Q86YV0 1011 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 AMER2Q8N7J2 671 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 FSIP1Q8NA03 581 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TEX19Q8NA77 164 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 USP38Q8NB14 1042 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 SLC2A12Q8TD20 617 aa4.9□□□□□ -1.63
EFCAB11-213ENST00000557685 TRMT61AQ96FX7 289 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms