RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NMRK1Q9NWW6 199 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 KCNH4Q9UQ05 1017 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 LRRC42Q9Y546 428 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 PRR5-ARHGAP8B1AHC4 643 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 CAPN9O14815 690 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 USP12O75317 370 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 BPGMP07738 259 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 ACAT1P24752 427 aaKnown RBP18.28■□□□□ 0.52
XRCC3-218ENST00000557439 PGM1P36871 562 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 ABCG1P45844 678 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 NDUFV1P49821 464 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 TUBP50607 506 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 ARHGAP8P85298 464 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 LGSNQ5TDP6 509 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 COLGALT1Q8NBJ5 622 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 HTR3CQ8WXA8 447 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 ZNF778Q96MU6 729 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 QKIQ96PU8 341 aaKnown RBP eCLIP18.28■□□□□ 0.52
XRCC3-218ENST00000557439 C11orf84Q9BUA3 381 aaPredicted RBP18.28■□□□□ 0.52
XRCC3-218ENST00000557439 DCLRE1BQ9H816 532 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 ZNF358Q9NW07 568 aa18.28■□□□□ 0.52
XRCC3-218ENST00000557439 CREB3O43889 395 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 BEST1O76090 585 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 ALDOAP04075 364 aaKnown RBP18.27■□□□□ 0.52
XRCC3-218ENST00000557439 C9orf57Q5W0N0 161 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.27■□□□□ 0.52
XRCC3-218ENST00000557439 DEFB106AQ8N104 65 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 SLC25A41Q8N5S1 370 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.27■□□□□ 0.52
XRCC3-218ENST00000557439 SPDL1Q96EA4 605 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 OSBPL1AQ9BXW6 950 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 SHCBP1LQ9BZQ2 653 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.27■□□□□ 0.52
XRCC3-218ENST00000557439 EMCNQ9ULC0 261 aa18.27■□□□□ 0.52
XRCC3-218ENST00000557439 TPP1O14773 563 aa18.27■□□□□ 0.51
XRCC3-218ENST00000557439 KLF11O14901 512 aa18.27■□□□□ 0.51
XRCC3-218ENST00000557439 STAU1O95793 577 aaKnown RBP18.27■□□□□ 0.51
XRCC3-218ENST00000557439 SNAI1O95863 264 aaPredicted RBP18.27■□□□□ 0.51
XRCC3-218ENST00000557439 GSRP00390 522 aa18.27■□□□□ 0.51
XRCC3-218ENST00000557439 SMPD1P17405 629 aa18.27■□□□□ 0.51
XRCC3-218ENST00000557439 PSMB4P28070 264 aa18.27■□□□□ 0.51
XRCC3-218ENST00000557439 SOX4Q06945 474 aaPredicted RBP18.27■□□□□ 0.51
XRCC3-218ENST00000557439 FASTKD1Q53R41 847 aaKnown RBP18.27■□□□□ 0.51
XRCC3-218ENST00000557439 CCNYQ8ND76 341 aa18.27■□□□□ 0.51
XRCC3-218ENST00000557439 ADAM32Q8TC27 787 aa18.27■□□□□ 0.51
XRCC3-218ENST00000557439 HBS1LQ9Y450 684 aaKnown RBP18.27■□□□□ 0.51
XRCC3-218ENST00000557439 CAPN14A8MX76 684 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 SMNDC1O75940 238 aaKnown RBP eCLIP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 MLH1P40692 756 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 SULT1E1P49888 294 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 ADIGQ0VDE8 80 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 STILQ15468 1287 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 MUM1Q2TAK8 710 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 DCAF6Q58WW2 860 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 SNX30Q5VWJ9 437 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 SLC26A9Q7LBE3 791 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 FBXO41Q8TF61 875 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 LENG1Q96BZ8 264 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 C7orf26Q96N11 449 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 AGAP3Q96P47 875 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 DONSONQ9NYP3 566 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 KCNK1O00180 336 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 ERVK-10P10266 1014 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 GNL1P36915 607 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 PTPN9P43378 593 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 BST2Q10589 180 aaKnown RBP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 NME3Q13232 169 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 STX3Q13277 289 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 PPIL2Q13356 520 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 SEMA5AQ13591 1074 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 KRT72Q14CN4 511 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 ZBTB6Q15916 424 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 ZNF792Q3KQV3 632 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 ATG16L1Q676U5 607 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 CRLF3Q8IUI8 442 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 PPP1R14CQ8TAE6 165 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 UCMAQ8WVF2 138 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 TFB1MQ8WVM0 346 aaKnown RBP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 DNAJC9Q8WXX5 260 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 CENPIQ92674 756 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-218ENST00000557439 USP6NLQ92738 828 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 SLC24A3Q9HC58 644 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 ACSS2Q9NR19 701 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 SYBUQ9NX95 663 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 KCNK4Q9NYG8 393 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 MOCS1Q9NZB8 636 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 USP3Q9Y6I4 520 aa18.26■□□□□ 0.51
XRCC3-218ENST00000557439 RNF103O00237 685 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 NEBLO76041 1014 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 PSMG1O95456 288 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 AMHP03971 560 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 TPSB2P20231 275 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 ARRB2P32121 409 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 CRHR1P34998 444 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 BLMHQ13867 455 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 PDE1CQ14123 709 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-218ENST00000557439 TPSAB1Q15661 275 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 POU5F2Q8N7G0 328 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms