RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 NAALADL1Q9UQQ1 740 aa14.37□□□□□ -0.11
VPS33B-206ENST00000557358 TIMM44O43615 452 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 ACSL4O60488 711 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 GABBR2O75899 941 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 TRUB2O95900 331 aaKnown RBP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 TDGF1P13385 188 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 STARD3Q14849 445 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 USP39Q53GS9 565 aaKnown RBP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 PKN3Q6P5Z2 889 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 ASCL5Q7RTU5 278 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 FAM217AQ8IXS0 508 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 CHPFQ8IZ52 775 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 ALLCQ8N6M5 410 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 GPR161Q8N6U8 529 aaKnown RBP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 HJURPQ8NCD3 748 aaPredicted RBP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 SEPT11Q9NVA2 429 aaKnown RBP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 EBF1Q9UH73 591 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 CYTH4Q9UIA0 394 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 STOML2Q9UJZ1 356 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 SIK3Q9Y2K2 1263 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 STARD13Q9Y3M8 1113 aa14.36□□□□□ -0.11
VPS33B-206ENST00000557358 ZFHX2Q9C0A1 2572 aaPredicted RBP14.36□□□□□ -0.11
VPS33B-206ENST00000557358 TSPAN3O60637 253 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 RPP40O75818 363 aaKnown RBP14.35□□□□□ -0.11
VPS33B-206ENST00000557358 MOCS2O96007 188 aaPredicted RBP14.35□□□□□ -0.11
VPS33B-206ENST00000557358 IGLV3-27P01718 113 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 NTSR1P30989 418 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 CCR1P32246 355 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 CDH5P33151 784 aaPredicted RBP14.35□□□□□ -0.11
VPS33B-206ENST00000557358 NOS2P35228 1153 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 SCNN1AP37088 669 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 KIR2DL1P43626 348 aaPredicted RBP14.35□□□□□ -0.11
VPS33B-206ENST00000557358 CDR2Q01850 454 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 EIF4HQ15056 248 aaKnown RBP14.35□□□□□ -0.11
VPS33B-206ENST00000557358 CRY1Q16526 586 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 MPP7Q5T2T1 576 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 FYB2Q5VWT5 728 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 DPY19L2P1Q6NXN4 242 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 FAM183BPQ6ZVS7 135 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 SLC26A9Q7LBE3 791 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 TAC4Q86UU9 113 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 DHX40Q8IX18 779 aaKnown RBP14.35□□□□□ -0.11
VPS33B-206ENST00000557358 DEFB106AQ8N104 65 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 PGBD3Q8N328 593 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 WDTC1Q8N5D0 677 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 IL17RCQ8NAC3 791 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 ADAM32Q8TC27 787 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 WFIKKN2Q8TEU8 576 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 EZH1Q92800 747 aaPredicted RBP14.35□□□□□ -0.11
VPS33B-206ENST00000557358 BTN2A3PQ96KV6 586 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 SPACA7Q96KW9 195 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 DDIT4Q9NX09 232 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 KIAA1549LQ6ZVL6 1849 aa14.35□□□□□ -0.11
VPS33B-206ENST00000557358 SPAG17Q6Q759 2223 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 SYNJ2BP-COX16A0A087WUM0 186 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 GFRA2O00451 464 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 TBL1XO60907 577 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 DAB1O75553 588 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 GRAP2O75791 330 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 F9P00740 461 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 TPM3P06753 285 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 ATP1A3P13637 1013 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 HOXB2P14652 356 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 FERP16591 822 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 DESP17661 470 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 NSFP46459 744 aaKnown RBP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 PXNP49023 591 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 KLK7P49862 253 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 JAM2P57087 298 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 RNASE9P60153 205 aaKnown RBP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 ELF2Q15723 593 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 PTPN20Q4JDL3 420 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 FAM102AQ5T9C2 384 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 NAA35Q5VZE5 725 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 LAIR1Q6GTX8 287 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 ANO7Q6IWH7 933 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 PPP1R2P3Q6NXS1 205 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 OLFML1Q6UWY5 402 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 NOP9Q86U38 636 aaKnown RBP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 PHTF2Q8N3S3 785 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 ZNF397Q8NF99 534 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 GAB3Q8WWW8 586 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 FCRL2Q96LA5 508 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 SLC2A13Q96QE2 648 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 PPP1R9BQ96SB3 815 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 CIPCQ9C0C6 399 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS33B-206ENST00000557358 COX16Q9P0S2 106 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 FBXO10Q9UK96 956 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 MYO6Q9UM54 1294 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 PLA2G4CQ9UP65 541 aa14.34□□□□□ -0.11
VPS33B-206ENST00000557358 F5H5T6 163 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 SYNCRIPO60506 623 aaKnown RBP14.33□□□□□ -0.12
VPS33B-206ENST00000557358 RHOBTB1O94844 696 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 MOCS3O95396 460 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 ERBB2P04626 1255 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms