RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CCNE1P24864 410 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 RPL13P26373 211 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 GRIK1P39086 918 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 PPP3CCP48454 512 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 MYL6P60660 151 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 SUMO1P63165 101 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 NUCB2P80303 420 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 CYP27A1Q02318 531 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 ENPEPQ07075 957 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 PPP2R5DQ14738 602 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 SGSM1Q2NKQ1 1148 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 TRIM61Q5EBN2 209 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 RNF219Q5W0B1 726 aaPredicted RBP10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 TXNDC8Q6A555 127 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 LHFPL2Q6ZUX7 228 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 C12orf40Q86WS4 652 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 SCN4BQ8IWT1 228 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 MYO1HQ8N1T3 1032 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 MAB21L3Q8N8X9 362 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 TAF4BQ92750 862 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 MYLPFQ96A32 169 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 PCED1BQ96HM7 432 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 CHAMP1Q96JM3 812 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 FAM83CQ9BQN1 747 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 MRPL45Q9BRJ2 306 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 XYLT2Q9H1B5 865 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 ZIM2Q9NZV7 527 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 NXF1Q9UBU9 619 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 NDRG2Q9UN36 371 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 FRMD4BQ9Y2L6 1034 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 COL4A2P08572 1712 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 TICRRQ7Z2Z1 1910 aa10.43□□□□□ -0.74
HNRNPC-228ENST00000557033 COL4A3Q01955 1670 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 LRRIQ3A6PVS8 624 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 A8MXQ7 604 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 SPECC1L-ADORA2AF8WAN1 911 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PRAMEF12O95522 483 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 LMNAP02545 664 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PABPC1P11940 636 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 P4HA1P13674 534 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 BDNFP23560 247 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 ANXA13P27216 316 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 MAOBP27338 520 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 CASP4P49662 377 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PDE6CP51160 858 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PCBP4P57723 403 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PSMC1P62191 440 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 NOP14P78316 857 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 AMPD2Q01433 879 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 CSTF1Q05048 431 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 RING1Q06587 406 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 C19orf57Q0VDD7 668 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 BIRC3Q13489 604 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 LRRC32Q14392 662 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 HLTFQ14527 1009 aaKnown RBP eCLIP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 ITPRIPL2Q3MIP1 535 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 ZACNQ401N2 412 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 ZNF667Q5HYK9 610 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 DGKKQ5KSL6 1271 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 SDHAF4Q5VUM1 108 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 TDRD10Q5VZ19 366 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 DENND5BQ6ZUT9 1274 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 GUF1Q8N442 669 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PLEKHO2Q8TD55 490 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 NELL1Q92832 810 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 USP13Q92995 863 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 WDR89Q96FK6 387 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 ELOVL4Q9GZR5 314 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 ARNT2Q9HBZ2 717 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 TRIM39Q9HCM9 518 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 GKN1Q9NS71 199 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 GTSE1Q9NYZ3 720 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 SUCOQ9UBS9 1254 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PCDHGA2Q9Y5H1 932 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PIEZO1Q92508 2521 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 USP34Q70CQ2 3546 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 PATJQ8NI35 1801 aa10.42□□□□□ -0.74
HNRNPC-228ENST00000557033 TRAV19A0A0A6YYK7 116 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 CREB3O43889 395 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 KINO60870 393 aaKnown RBP10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 ITGAVP06756 1048 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 HDCP19113 662 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 CDC25BP30305 580 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 ARL4DP49703 201 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 CCR3P51677 355 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 VAMP7P51809 220 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 DLG4P78352 724 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 MTAPQ13126 283 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 RUNX3Q13761 415 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 PDGFRLQ15198 375 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 ZNF699Q32M78 642 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 MDH1BQ5I0G3 518 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 CC2D1AQ6P1N0 951 aaPredicted RBP10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 INTS8Q75QN2 995 aaKnown RBP10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 SV2AQ7L0J3 742 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 MCATQ8IVS2 390 aaKnown RBP10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 ADSSL1Q8N142 457 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 KIAA1958Q8N8K9 716 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 ZBTB44Q8NCP5 570 aa10.41□□□□□ -0.74
HNRNPC-228ENST00000557033 B3GALNT2Q8NCR0 500 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms