RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 RACK1P63244 317 aaKnown RBP14.21□□□□□ -0.14
SHMT2-226ENST00000556825 IFITM3Q01628 133 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 PMS2P3Q13401 168 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 DPY19L2P1Q6NXN4 242 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 LLGL2Q6P1M3 1020 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 PSD4Q8NDX1 1056 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 ITGA11Q9UKX5 1188 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 VPS4AQ9UN37 437 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 UGT2A1Q9Y4X1 527 aa14.21□□□□□ -0.14
SHMT2-226ENST00000556825 A0A1B0GUL6 1792 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 C5P01031 1676 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 C7orf72A4D263 438 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 KLF11O14901 512 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 BET1O15155 118 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 EPN2O95208 641 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 MAP3K6O95382 1288 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 PROCP04070 461 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 DHRS4L1P0CG22 281 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 ZNF26P17031 533 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 COPAP53621 1224 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 MLLT10P55197 1068 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 POU6F2P78424 691 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 FKBP3Q00688 224 aaKnown RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 NME3Q13232 169 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 GCKRQ14397 625 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 RAB39AQ14964 217 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 DLG2Q15700 870 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 FAM171BQ6P995 826 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 ZNF790Q6PG37 636 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 CYP20A1Q6UW02 462 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 TOM1L2Q6ZVM7 507 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 TRIM59Q8IWR1 403 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 SLC30A5Q8TAD4 765 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 BCL7CQ8WUZ0 217 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 ALKBH8Q96BT7 664 aaKnown RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 CEP170P1Q96L14 293 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 TMEM79Q9BSE2 394 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 NAA50Q9GZZ1 169 aaKnown RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 COPS7BQ9H9Q2 264 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 DIABLOQ9NR28 239 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 PSMC3IPQ9P2W1 217 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-226ENST00000556825 NUP50Q9UKX7 468 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 IGSF9BQ9UPX0 1349 aa14.2□□□□□ -0.14
SHMT2-226ENST00000556825 MYH3P11055 1940 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 NDUFA2O43678 99 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 GAS7O60861 476 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 NADKO95544 446 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-226ENST00000556825 KRT8P05787 483 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 UCHL3P15374 230 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 BGNP21810 368 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 CD9P21926 228 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 GRM5P41594 1212 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 MCAMP43121 646 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 HCAR3P49019 387 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 RAD51Q06609 339 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 SNTA1Q13424 505 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 LAPTM5Q13571 262 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 UBAP2LQ14157 1087 aaKnown RBP14.19□□□□□ -0.14
SHMT2-226ENST00000556825 CLEC16AQ2KHT3 1053 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 BNC2Q6ZN30 1099 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-226ENST00000556825 FKBP9P1Q75LS8 142 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 ARMC8Q8IUR7 673 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 LILRA2Q8N149 483 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 CARNMT1Q8N4J0 409 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 BANPQ8N9N5 519 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 GLIS3Q8NEA6 775 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 GRK7Q8WTQ7 553 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 KCNK16Q96T55 309 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 FOXP3Q9BZS1 431 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 IFT22Q9H7X7 185 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 IGSF5Q9NSI5 407 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 NEURL1BA8MQ27 555 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 E5RJQ4 531 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 AURKAO14965 403 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 ACTN1P12814 892 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 CASP3P42574 277 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 MARCKSL1P49006 195 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 TMBIM6P55061 237 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 MARSP56192 900 aaKnown RBP14.19□□□□□ -0.14
SHMT2-226ENST00000556825 OCA2Q04671 838 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 DALRD3Q5D0E6 543 aaKnown RBP14.19□□□□□ -0.14
SHMT2-226ENST00000556825 ATG16L1Q676U5 607 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 C11orf63Q6NUN7 778 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 LYPD8Q6UX82 237 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 METTL3Q86U44 580 aaKnown RBP14.19□□□□□ -0.14
SHMT2-226ENST00000556825 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 ZNF654Q8IZM8 581 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 TCAIMQ8N3R3 496 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 ZNF560Q96MR9 790 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 EFHD1Q9BUP0 239 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 C1QTNF7Q9BXJ2 289 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 SLA2Q9H6Q3 261 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 TRIM39Q9HCM9 518 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 TNFRSF10DQ9UBN6 386 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 STRIP2Q9ULQ0 834 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 SLC27A5Q9Y2P5 690 aa14.19□□□□□ -0.14
SHMT2-226ENST00000556825 ZNF532Q9HCE3 1301 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms