RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ARL10Q8N8L6 244 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 LINC00301Q8NCQ3 95 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 TGFBRAP1Q8WUH2 860 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 MRPS27Q92552 414 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 TEKT1Q969V4 418 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 TBC1D31Q96DN5 1066 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 TMEM41AQ96HV5 264 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 NT5C1BQ96P26 610 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 SORCS2Q96PQ0 1159 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 ASB2Q96Q27 587 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 USP28Q96RU2 1077 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 PPP1R9BQ96SB3 815 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 TREX2Q9BQ50 279 aaPredicted RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 GPR87Q9BY21 358 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 MRPL9Q9BYD2 267 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 DHX36Q9H2U1 1008 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 CLSTN2Q9H4D0 955 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 BRD9Q9H8M2 597 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 NSMCE4AQ9NXX6 385 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 DACT1Q9NYF0 836 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 HOOK1Q9UJC3 728 aaKnown RBP5.58□□□□□ -1.52
SRP54-211ENST00000556445 GPR34Q9UPC5 381 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 HS3ST3A1Q9Y663 406 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 MYH1P12882 1939 aa5.58□□□□□ -1.52
SRP54-211ENST00000556445 F5H0A9 414 aaPredicted RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 MASP2O00187 686 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 KPNA5O15131 536 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 HOXA3O43365 443 aaPredicted RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 ZNF202O95125 648 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 LTA4HP09960 611 aaKnown RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 KRT2P35908 639 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 STAT1P42224 750 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 TECP42680 631 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 ZNF131P52739 623 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 COPAP53621 1224 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 LGALS4P56470 323 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 WNT3AP56704 352 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 BPIFB3P59826 476 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 DCAF7P61962 342 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 SLC25A3Q00325 362 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 TFAP4Q01664 338 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 TROAPQ12815 778 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 KLF10Q13118 480 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 EZH2Q15910 746 aaKnown RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 HECTD3Q5T447 861 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 FAM173BQ6P4H8 233 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 ZNF449Q6P9G9 518 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 NPNTQ6UXI9 565 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 RBM43Q6ZSC3 357 aaKnown RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 TMTC3Q6ZXV5 915 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 ENOSF1Q7L5Y1 443 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 UBE2Q1Q7Z7E8 422 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 BRSK2Q8IWQ3 736 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 GSPT2Q8IYD1 628 aaKnown RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 NRSN1Q8IZ57 195 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 CACNA2D3Q8IZS8 1091 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 CAMKK1Q8N5S9 505 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 MB21D1Q8N884 522 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 CCDC148Q8NFR7 591 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 CCDC12Q8WUD4 166 aaPredicted RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 IPCEF1Q8WWN9 437 aaPredicted RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 ASB12Q8WXK4 309 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 PHKBQ93100 1093 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 MVB12AQ96EY5 273 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 CCDC17Q96LX7 622 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 TIGD1Q96MW7 591 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 ACAP3Q96P50 834 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 PYM1Q9BRP8 204 aaKnown RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 PCED1AQ9H1Q7 454 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 CCM2LQ9NUG4 571 aaPredicted RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.57□□□□□ -1.52
SRP54-211ENST00000556445 GRHPRQ9UBQ7 328 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 PADI4Q9UM07 663 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 FOCADQ5VW36 1801 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 C10orf71Q711Q0 1435 aa5.57□□□□□ -1.52
SRP54-211ENST00000556445 PLIN4Q96Q06 1357 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 CDK5RAP2Q96SN8 1893 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 FLT1P17948 1338 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 CYP2D7A0A087X1C5 515 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 A6NLC8 198 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 RHPN2P1A8MT19 583 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 GRXCR1A8MXD5 290 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 GOLGA6L6A8MZA4 724 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 AHCYL1O43865 530 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 DKC1O60832 514 aaKnown RBP eCLIP5.56□□□□□ -1.52
SRP54-211ENST00000556445 PRDM1O75626 825 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 IPO13O94829 963 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 POLBP06746 335 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 TPM3P06753 285 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 TOP1P11387 765 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 SCG2P13521 617 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 ATP1A3P13637 1013 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 RXRAP19793 462 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 ENPP1P22413 925 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 CMA1P23946 247 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 AGFG1P52594 562 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 NAP1L1P55209 391 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 TSPY1Q01534 308 aa5.56□□□□□ -1.52
SRP54-211ENST00000556445 CEBPZQ03701 1054 aaKnown RBP5.56□□□□□ -1.52
SRP54-211ENST00000556445 MRPL49Q13405 166 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms