RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 LOC105369274A0A096LPK9 316 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 LOC102723532A0A0G2JNH3 316 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 KIF28PB7ZC32 967 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 RNF8O76064 485 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 ARHGAP25P42331 645 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 TRAPPC10P48553 1259 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 VPS41P49754 854 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 BLMHQ13867 455 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 PFKFB3Q16875 520 aaPredicted RBP6.64□□□□□ -1.35
LINC00871-202ENST00000556071 CCDC38Q502W7 563 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 KIAA1614Q5VZ46 1190 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 MIS18BP1Q6P0N0 1132 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 CCDC174Q6PII3 467 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 YTHDF3Q7Z739 585 aaKnown RBP6.64□□□□□ -1.35
LINC00871-202ENST00000556071 NEK8Q86SG6 692 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 C16orf71Q8IYS4 520 aaPredicted RBP6.64□□□□□ -1.35
LINC00871-202ENST00000556071 OR4N4Q8N0Y3 316 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 EID2BQ96D98 161 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 ARPC5LQ9BPX5 153 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 ASNSD1Q9NWL6 643 aa6.64□□□□□ -1.35
LINC00871-202ENST00000556071 HEMK1Q9Y5R4 338 aaPredicted RBP6.64□□□□□ -1.35
LINC00871-202ENST00000556071 SMIM35A0A1B0GVV1 85 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 RRHO14718 337 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 SLC3A2P08195 630 aaKnown RBP6.63□□□□□ -1.35
LINC00871-202ENST00000556071 ITGA2BP08514 1039 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 PRR35P0CG20 571 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 THBS4P35443 961 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 AGTR2P50052 363 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 YPEL5P62699 121 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 CBFBQ13951 182 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 FAM83BQ5T0W9 1011 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 ANKRD40Q6AI12 368 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 SLC18B1Q6NT16 456 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 TFAP2DQ7Z6R9 452 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 CACNA2D3Q8IZS8 1091 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 MAP4K1Q92918 833 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 FAR2Q96K12 515 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 ARL8BQ9NVJ2 186 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 MAFFQ9ULX9 164 aa6.63□□□□□ -1.35
LINC00871-202ENST00000556071 FAM90A18PA6NE21 464 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 FAM90A16PA6NEW6 464 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 FAM90A9PA6NNJ1 464 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 FAM90A5PA8MXJ8 464 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 TTC34A8MYJ7 566 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 FAM90A15PP0C7V4 464 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 FAM90A14PP0C7W9 464 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 PEPDP12955 493 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 SFPQP23246 707 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC00871-202ENST00000556071 SLC8A1P32418 973 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 HOXD12P35452 270 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 STAT6P42226 847 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 KRT72Q14CN4 511 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 SRSF7Q16629 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC00871-202ENST00000556071 AAK1Q2M2I8 961 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 MEX3CQ5U5Q3 659 aaKnown RBP6.62□□□□□ -1.35
LINC00871-202ENST00000556071 CNGA4Q8IV77 575 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 RTKNQ9BST9 563 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 MECRQ9BV79 373 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 CCDC134Q9H6E4 229 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 PTPRHQ9HD43 1115 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 GRHPRQ9UBQ7 328 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 CNTN6Q9UQ52 1028 aa6.62□□□□□ -1.35
LINC00871-202ENST00000556071 SIRT4Q9Y6E7 314 aaPredicted RBP6.62□□□□□ -1.35
LINC00871-202ENST00000556071 DSCR3O14972 297 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 NKX2-8O15522 239 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 PPP6R2O75170 966 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 ACTL6BO94805 426 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 TACR3P29371 465 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 IDUAP35475 653 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 CHKAP35790 457 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 ABCG1P45844 678 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 PNLIPRP1P54315 467 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 FAM3BP58499 235 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 SF3A3Q12874 501 aaKnown RBP eCLIP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 EZH2Q15910 746 aaKnown RBP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 TRIM60Q495X7 471 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 SULT6B1Q6IMI4 303 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 LAS2Q8IYD9 372 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 SCAMP5Q8TAC9 235 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 ASB12Q8WXK4 309 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 RSC1A1Q92681 617 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 VOPP1Q96AW1 172 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 TRMT61AQ96FX7 289 aaKnown RBP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 REXO5Q96IC2 774 aaKnown RBP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 FAM118BQ9BPY3 351 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 TM2D2Q9BX73 214 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 MAGEH1Q9H213 219 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 AGO4Q9HCK5 861 aaKnown RBP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 HERC5Q9UII4 1024 aaKnown RBP6.61□□□□□ -1.35
LINC00871-202ENST00000556071 RAB21Q9UL25 225 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 NFU1Q9UMS0 254 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 ZBTB1Q9Y2K1 713 aa6.61□□□□□ -1.35
LINC00871-202ENST00000556071 BCAR3O75815 825 aa6.6□□□□□ -1.35
LINC00871-202ENST00000556071 KELP23276 732 aa6.6□□□□□ -1.35
LINC00871-202ENST00000556071 ATP5F1P24539 256 aaPredicted RBP6.6□□□□□ -1.35
LINC00871-202ENST00000556071 DAZAP2Q15038 168 aaPredicted RBP6.6□□□□□ -1.35
LINC00871-202ENST00000556071 ATPAF1Q5TC12 328 aaPredicted RBP6.6□□□□□ -1.35
LINC00871-202ENST00000556071 ZNF626Q68DY1 528 aa6.6□□□□□ -1.35
LINC00871-202ENST00000556071 SLC2A7Q6PXP3 512 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms