RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 BPTFQ12830 3046 aa15.04■□□□□ -0
CHMP4BP1-201ENST00000556017 GOLGA4Q13439 2230 aaKnown RBP15.04■□□□□ -0
CHMP4BP1-201ENST00000556017 NPC1O15118 1278 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 KIF20AO95235 890 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 RALAP11233 206 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 HLA-EP13747 358 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 SGSHP51688 502 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 YWHAGP61981 247 aaKnown RBP eCLIP15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 SCAPQ12770 1279 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 CAMK2GQ13555 558 aaPredicted RBP15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 HNRNPDQ14103 355 aaKnown RBP15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 SYCP2LQ5T4T6 812 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 KRT39Q6A163 491 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 ANKS1BQ7Z6G8 1248 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 UBR7Q8N806 425 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 ANKRD52Q8NB46 1076 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 SIPA1Q96FS4 1042 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 TMEM176AQ96HP8 235 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 FAXDC2Q96IV6 333 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 HEXIM2Q96MH2 286 aaKnown RBP15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 ORAI3Q9BRQ5 295 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 SLC2A11Q9BYW1 496 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 ULBP1Q9BZM6 244 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 IMPG2Q9BZV3 1241 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 DCLK3Q9C098 648 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 TMEM245Q9H330 911 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 EIF2B4Q9UI10 523 aaKnown RBP15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 STOML2Q9UJZ1 356 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 LHX6Q9UPM6 363 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 GPSM3Q9Y4H4 160 aa15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 NYNRINQ9P2P1 1898 aaKnown RBP15.03■□□□□ -0
CHMP4BP1-201ENST00000556017 SLC12A8A0AV02 714 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 ZNF883P0CG24 379 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 GTF2H1P32780 548 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 PSMC2P35998 433 aaKnown RBP15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 TKTL1P51854 596 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 PDE4CQ08493 712 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 ADAM9Q13443 819 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 STARD3Q14849 445 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 EIF4HQ15056 248 aaKnown RBP15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 PTPRNQ16849 979 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 CBWD6Q4V339 395 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 CBWD3Q5JTY5 395 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 CBWD5Q5RIA9 395 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 ADIPOR2Q86V24 386 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 CACUL1Q86Y37 369 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 SMYD4Q8IYR2 804 aaPredicted RBP15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 ZNF366Q8N895 744 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 WFDC5Q8TCV5 224 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 CDK5RAP1Q96SZ6 601 aaKnown RBP15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 ZDHHC5Q9C0B5 715 aa15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 C6orf106Q9H6K1 298 aaPredicted RBP15.02■□□□□ -0
CHMP4BP1-201ENST00000556017 YJEFN3A6XGL0 299 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MEI4A8MW99 385 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 C10orf142B7Z368 130 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 E7ENQ6 273 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 BCAT2O15382 392 aaPredicted RBP15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ZBTB24O43167 697 aaPredicted RBP15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ZBED1O96006 694 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 GNSP15586 552 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ACSL1P33121 698 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SYKP43405 635 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 HLA-BQ31612 363 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PKDCCQ504Y2 493 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KRBA2Q6ZNG9 492 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TADA2BQ86TJ2 420 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SPRYD3Q8NCJ5 442 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 FBXL13Q8NEE6 735 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PRCCQ92733 491 aaPredicted RBP15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 PLD4Q96BZ4 506 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 LMLNQ96KR4 655 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 ZSWIM1Q9BR11 485 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 RAB20Q9NX57 234 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 BTBD3Q9Y2F9 522 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 COQ4Q9Y3A0 265 aa15.01□□□□□ -0.01
CHMP4BP1-201ENST00000556017 A0A1B0GVT2 93 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TSPAN3O60637 253 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 EPHX1P07099 455 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KRT13P13646 458 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 OXTRP30559 389 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MXI1P50539 228 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 EDRF1Q3B7T1 1238 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KCNT1Q5JUK3 1230 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MARCH9Q86YJ5 346 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 FMNL3Q8IVF7 1028 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 OR2T3Q8NH03 318 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 DDI1Q8WTU0 396 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CYB5D2Q8WUJ1 264 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 UCMAQ8WVF2 138 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MYO19Q96H55 970 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 NUP58Q9BVL2 599 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 CIPCQ9C0C6 399 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 MIR1-1HGQ9H1L0 117 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 GAREM1Q9H706 876 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TM7SF3Q9NS93 570 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 KIAA1522Q9P206 1035 aaPredicted RBP15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 SFMBT1Q9UHJ3 866 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 TSPAN16Q9UKR8 245 aa15□□□□□ -0.01
CHMP4BP1-201ENST00000556017 GCN1Q92616 2671 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms