RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 HEBP1Q9NRV9 189 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CUL9Q8IWT3 2517 aa4.09□□□□□ -1.76
LINC00648-202ENST00000555985 CHD5Q8TDI0 1954 aa4.09□□□□□ -1.76
LINC00648-202ENST00000555985 A0A1B0GTH6 734 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 A0A1W2PQH9 124 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TCRBV5S1A1TA0A578 114 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CTAGE15A4D2H0 777 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 GOLGA6CA6NDK9 693 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CHURC1-FNTBB4DL54 471 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 C10orf142B7Z368 130 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 F8VZ95 297 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SPECC1L-ADORA2AF8WAN1 911 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 AGPSO00116 658 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 FOXN3O00409 490 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 HOXC11O43248 304 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 LILRB5O75023 590 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 KLKB1P03952 638 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 GOLGA6DP0CG33 693 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CTAGE8P0CG41 777 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 ATP1A3P13637 1013 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 ARSAP15289 507 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 EZRP15311 586 aaKnown RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 UCHL3P15374 230 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CHRNB2P17787 502 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 GDI1P31150 447 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 HOXA6P31267 233 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CTHP32929 405 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 GGCXP38435 758 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 KLK7P49862 253 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 RPS6KA3P51812 740 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 DAOAP59103 153 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 GNGT1P63211 74 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TNK2Q07912 1038 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 PTP4A2Q12974 167 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TBX2Q13207 712 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 MTF1Q14872 753 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 PDGFRLQ15198 375 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TRIP4Q15650 581 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 OTUD1Q5VV17 481 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 FSTL4Q6MZW2 842 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 DENND1BQ6P3S1 775 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 C1orf228Q6PIY5 440 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TMEM270Q6UE05 265 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 KIAA0907Q7Z7F0 614 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CTAGE6Q86UF2 777 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CCDC50Q8IVM0 306 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CTAGE4Q8IX94 777 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 DTWD2Q8NBA8 298 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SH3RF2Q8TEC5 729 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 COG1Q8WTW3 980 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 ZNF606Q8WXB4 792 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 MRPS31Q92665 395 aaKnown RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 FBXO32Q969P5 355 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 NT5C3BQ969T7 300 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 THOC1Q96FV9 657 aaKnown RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SLC39A13Q96H72 371 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 HEXIM2Q96MH2 286 aaKnown RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SH3GL2Q99962 352 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 IRX2Q9BZI1 471 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CHRDQ9H2X0 955 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 UBE2TQ9NPD8 197 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 ACP6Q9NPH0 428 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CNGB3Q9NQW8 809 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 GOLGA6AQ9NYA3 693 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TRPM5Q9NZQ8 1165 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 RAPGEFL1Q9UHV5 662 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CA14Q9ULX7 337 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 PCDHGA10Q9Y5H3 936 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 A6NNZ2 444 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 K7EQS6 105 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 ZNF263O14978 683 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 COQ9O75208 318 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SKAP2O75563 359 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SERPINC1P01008 464 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CYP1A1P04798 512 aaPredicted RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 CYP17A1P05093 508 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SCNN1AP37088 669 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 EIF2DP41214 584 aaKnown RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 NBL1P41271 181 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 MFAP3P55082 362 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 MESP2Q0VG99 397 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 NNTQ13423 1086 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 RUNX3Q13761 415 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 NAA25Q14CX7 972 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SNCBQ16143 134 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 WHAMMP3Q1A5X7 153 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TUBB8Q3ZCM7 444 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 ZNF394Q53GI3 561 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 HECTD3Q5T447 861 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 TRIM68Q6AZZ1 485 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 RHBDF2Q6PJF5 856 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 MICALCLQ6ZW33 695 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 ARCQ7LC44 396 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 DDX42Q86XP3 938 aaKnown RBP eCLIP4.08□□□□□ -1.76
LINC00648-202ENST00000555985 PPM1KQ8N3J5 372 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 SYNPOQ8N3V7 929 aa4.08□□□□□ -1.76
LINC00648-202ENST00000555985 BAP1Q92560 729 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms