RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 WASF3Q9UPY6 502 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 CFAP47Q6ZTR5 3102 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 IGF2RP11717 2491 aa20.61■□□□□ 0.89
PRKCH-219ENST00000555906 YJEFN3A6XGL0 299 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 E7ENQ6 273 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 DAOAP59103 153 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 LRMPQ12912 555 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 FOXC1Q12948 553 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 SEMA3BQ13214 749 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 MPPE1Q53F39 396 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 SYCP2LQ5T4T6 812 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 BSPRYQ5W0U4 402 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 MSANTD2Q6P1R3 559 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 FOXR2Q6PJQ5 311 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 TMEM270Q6UE05 265 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 LCLAT1Q6UWP7 414 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 PIP4P1Q86T03 277 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 ELOA2Q8IYF1 753 aaPredicted RBP20.6■□□□□ 0.89
PRKCH-219ENST00000555906 HDDC3Q8N4P3 179 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 UBA3Q8TBC4 463 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 GTPBP2Q9BX10 602 aaKnown RBP20.6■□□□□ 0.89
PRKCH-219ENST00000555906 CIPCQ9C0C6 399 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 MKRN2Q9H000 416 aaKnown RBP20.6■□□□□ 0.89
PRKCH-219ENST00000555906 FSCN3Q9NQT6 498 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 ELOVL2Q9NXB9 296 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 NFE2L3Q9Y4A8 694 aa20.6■□□□□ 0.89
PRKCH-219ENST00000555906 ARHGAP33O14559 1287 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 SYNCRIPO60506 623 aaKnown RBP20.59■□□□□ 0.89
PRKCH-219ENST00000555906 OPHN1O60890 802 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 NCAM1P13591 858 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 STILQ15468 1287 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 CCDC40Q4G0X9 1142 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 WDR45BQ5MNZ6 344 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 MINDY1Q8N5J2 469 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 WFIKKN2Q8TEU8 576 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 IRGQQ8WZA9 623 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 TFAP2BQ92481 460 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 EDEM1Q92611 657 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 SFMBT1Q9UHJ3 866 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 MAN1B1Q9UKM7 699 aa20.59■□□□□ 0.89
PRKCH-219ENST00000555906 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.59■□□□□ 0.89
PRKCH-219ENST00000555906 P4HA2O15460 535 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 TIMM44O43615 452 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 IGLV3-19P01714 112 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 SYPP08247 313 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 CD44P16070 742 aaKnown RBP20.58■□□□□ 0.89
PRKCH-219ENST00000555906 PRKCHP24723 683 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 COPAP53621 1224 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 ADGRF1Q5T601 910 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 TMEM215Q68D42 235 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 TTI2Q6NXR4 508 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 RGL4Q8IZJ4 473 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 SLC35F5Q8WV83 523 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 TOE1Q96GM8 510 aaKnown RBP20.58■□□□□ 0.89
PRKCH-219ENST00000555906 ITM2CQ9NQX7 267 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 DNAAF2Q9NVR5 837 aaKnown RBP20.58■□□□□ 0.89
PRKCH-219ENST00000555906 WSB2Q9NYS7 404 aaPredicted RBP20.58■□□□□ 0.89
PRKCH-219ENST00000555906 PCDHB4Q9Y5E5 795 aa20.58■□□□□ 0.89
PRKCH-219ENST00000555906 WDFY3Q8IZQ1 3526 aa20.58■□□□□ 0.88
PRKCH-219ENST00000555906 NYNRINQ9P2P1 1898 aaKnown RBP20.58■□□□□ 0.88
PRKCH-219ENST00000555906 CHD6Q8TD26 2715 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 M0QYV0 167 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 MSI1O43347 362 aaKnown RBP20.57■□□□□ 0.88
PRKCH-219ENST00000555906 IGLV3-27P01718 113 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 PROS1P07225 676 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 LCP1P13796 627 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 GNSP15586 552 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 HLA-FP30511 346 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 CETN1Q12798 172 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 PLEKHG6Q3KR16 790 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 SERPINA13PQ6UXR4 307 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 UNQ6494/PRO21346Q6UXR6 183 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 TMPRSS6Q8IU80 811 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 PPM1KQ8N3J5 372 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.57■□□□□ 0.88
PRKCH-219ENST00000555906 CADM4Q8NFZ8 388 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 SORCS1Q8WY21 1168 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 PRCCQ92733 491 aaPredicted RBP20.57■□□□□ 0.88
PRKCH-219ENST00000555906 SIPA1Q96FS4 1042 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 ADAM33Q9BZ11 813 aa20.57■□□□□ 0.88
PRKCH-219ENST00000555906 IRX2Q9BZI1 471 aaPredicted RBP20.57■□□□□ 0.88
PRKCH-219ENST00000555906 AKAP13Q12802 2813 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 MEI4A8MW99 385 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 KCNJ18B7U540 433 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 EPHX1P07099 455 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 OXTRP30559 389 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 RGS7P49802 495 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 TPMTP51580 245 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 GCNT1Q02742 428 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 ARID5AQ03989 594 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 CNGA2Q16280 664 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 NUGGCQ68CJ6 796 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 PMF1Q6P1K2 205 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 LMO3Q8TAP4 145 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 DNASE2BQ8WZ79 361 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 KAT5Q92993 513 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 ZSWIM1Q9BR11 485 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
PRKCH-219ENST00000555906 BICDL2A1A5D9 508 aa20.55■□□□□ 0.88
PRKCH-219ENST00000555906 TSPAN3O60637 253 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms