RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 USP36Q9P275 1121 aaKnown RBP13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 SLC6A14Q9UN76 642 aa13.26□□□□□ -0.29
HNRNPC-221ENST00000555883 IRAK2O43187 625 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 ENGP17813 658 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 IL12RB1P42701 662 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 LRMPQ12912 555 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 PAK1Q13153 545 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 NNTQ13423 1086 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 NUGGCQ68CJ6 796 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 PMF1Q6P1K2 205 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 BEND5Q7L4P6 421 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 ARMCX6Q7L4S7 300 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 KIAA0907Q7Z7F0 614 aaPredicted RBP13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 UNC45BQ8IWX7 931 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 CADM4Q8NFZ8 388 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 UBA3Q8TBC4 463 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 WFIKKN2Q8TEU8 576 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 PRDM16Q9HAZ2 1276 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 ITM2CQ9NQX7 267 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 SUSD2Q9UGT4 822 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 PCDHB4Q9Y5E5 795 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 RAD54BQ9Y620 910 aa13.25□□□□□ -0.29
HNRNPC-221ENST00000555883 CHD8Q9HCK8 2581 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 WASH3PC4AMC7 463 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 M0QYV0 167 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 RNF225M0QZC1 329 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 SART1O43290 800 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 SYNCRIPO60506 623 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 GABBR2O75899 941 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 FGFR1OPO95684 399 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 AFPP02771 609 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 LTFP02788 710 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 NCAM1P13591 858 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 CD6P30203 668 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 OXTRP30559 389 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 KCNH2Q12809 1159 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 ZNF234Q14588 700 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 SYCP2LQ5T4T6 812 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 SH3PXD2AQ5TCZ1 1133 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 KLHL10Q6JEL2 608 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 SLC41A1Q8IVJ1 513 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 STK32AQ8WU08 396 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 NDRG1Q92597 394 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 EDEM1Q92611 657 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 GOLGA1Q92805 767 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 TMA16Q96EY4 203 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 ZSWIM1Q9BR11 485 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 TRIM62Q9BVG3 475 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 MKRN2Q9H000 416 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 PCED1AQ9H1Q7 454 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 FBRSQ9HAH7 460 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 WSB2Q9NYS7 404 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 SFMBT1Q9UHJ3 866 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 CYP8B1Q9UNU6 501 aa13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 CNOT1A5YKK6 2376 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-221ENST00000555883 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 NDUFS2O75306 463 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 SYPP08247 313 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 LCP1P13796 627 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 HLA-FP30511 346 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 ACADSBP45954 432 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 SLC11A2P49281 568 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 COPAP53621 1224 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 SEMA3BQ13214 749 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 SLC14A1Q13336 389 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 CAMK2GQ13555 558 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 WDR45BQ5MNZ6 344 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 TMEM215Q68D42 235 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 ISM2Q6H9L7 571 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 ENOSF1Q7L5Y1 443 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 PIP4P1Q86T03 277 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 AHI1Q8N157 1196 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 DNASE2BQ8WZ79 361 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 KAT5Q92993 513 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 ZDHHC5Q9C0B5 715 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 CIPCQ9C0C6 399 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 TMEM245Q9H330 911 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 SLC32A1Q9H598 525 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 DNAAF2Q9NVR5 837 aaKnown RBP13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 CLEC4EQ9ULY5 219 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 WASF3Q9UPY6 502 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 CTNND2Q9UQB3 1225 aa13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 MYO18AQ92614 2054 aaKnown RBP13.23□□□□□ -0.29
HNRNPC-221ENST00000555883 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 ATXN2Q99700 1313 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 CEP295Q9C0D2 2601 aa13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 CFIP05156 583 aa13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 GNSP15586 552 aa13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 BRD2P25440 801 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 GPD2P43304 727 aa13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 TPMTP51580 245 aa13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
HNRNPC-221ENST00000555883 ARID5AQ03989 594 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms