RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 CCDC85BQ15834 202 aaPredicted RBP8.13□□□□□ -1.11
LINC00641-202ENST00000555688 UPP1Q16831 310 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 UBAP2Q5T6F2 1119 aaKnown RBP8.13□□□□□ -1.11
LINC00641-202ENST00000555688 ARCQ7LC44 396 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 PRUNE1Q86TP1 453 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 RTN4RL1Q86UN2 441 aaPredicted RBP8.13□□□□□ -1.11
LINC00641-202ENST00000555688 ZDHHC17Q8IUH5 632 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 GLIS1Q8NBF1 620 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 B3GALNT2Q8NCR0 500 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 OR2W6PQ8NHA6 318 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 SLC35B2Q8TB61 432 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 GRK7Q8WTQ7 553 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 CLEC4CQ8WTT0 213 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 NKD2Q969F2 451 aaPredicted RBP8.13□□□□□ -1.11
LINC00641-202ENST00000555688 EXOC4Q96A65 974 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 HSFY1Q96LI6 401 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 CFAP57Q96MR6 1250 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 ADAM2Q99965 735 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 DUSP16Q9BY84 665 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 FAM129AQ9BZQ8 928 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 FAM204AQ9H8W3 233 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 LRRC4CQ9HCJ2 640 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 PRDM6Q9NQX0 595 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 GGT7Q9UJ14 662 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 ATP8A1Q9Y2Q0 1164 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 SQORQ9Y6N5 450 aa8.13□□□□□ -1.11
LINC00641-202ENST00000555688 SHISA8B8ZZ34 492 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 GOLGA8KD6RF30 607 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CLDN5O00501 218 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 XPO1O14980 1071 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CKBP12277 381 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TFE3P19532 575 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 IL4RP24394 825 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ACAT1P24752 427 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 RPL9P32969 192 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 MAP2K2P36507 400 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ZNF844Q08AG5 666 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 BYSLQ13895 437 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TRIP13Q15645 432 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ZFYVE27Q5T4F4 411 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 LYPD4Q6UWN0 246 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 BBS12Q6ZW61 710 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 SLC26A9Q7LBE3 791 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ERMP1Q7Z2K6 904 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 HACE1Q8IYU2 909 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ALLCQ8N6M5 410 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 RAET1EQ8TD07 263 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CENPIQ92674 756 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TNIP3Q96KP6 325 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 NECAB3Q96P71 396 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 RSRP1Q9BUV0 290 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TGIF2Q9GZN2 237 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TRPV6Q9H1D0 765 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ADAM7Q9H2U9 754 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 PABPC3Q9H361 631 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 SEMA4AQ9H3S1 761 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TMBIM4Q9HC24 238 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CRTAC1Q9NQ79 661 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 PSD3Q9NYI0 1048 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 SAE1Q9UBE0 346 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CASTOR2A6NHX0 329 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 M0R082 166 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 INPPL1O15357 1258 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CST8O60676 142 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CAND2O75155 1236 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 GAS8O95995 478 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 RARGP13631 454 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CHKAP35790 457 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 PTPN9P43378 593 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ACADSBP45954 432 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 RAB27AP51159 221 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ITGA8P53708 1063 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 PMS2P54278 862 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 VCPP55072 806 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 HDAC4P56524 1084 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 SNX16P57768 344 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 PCDH1Q08174 1060 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ADCY1Q08828 1119 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 PIGZQ86VD9 579 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ECHDC2Q86YB7 292 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TMEM86AQ8N2M4 240 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 KCTD6Q8NC69 237 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ZNF417Q8TAU3 575 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 UBLCP1Q8WVY7 318 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 SNF8Q96H20 258 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 CCDC114Q96M63 670 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 GLT1D1Q96MS3 346 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ZNF587Q96SQ5 575 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 RTP3Q9BQQ7 232 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 DDX23Q9BUQ8 820 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 RSAD1Q9HA92 442 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 DDX43Q9NXZ2 648 aaKnown RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 ASIC3Q9UHC3 531 aa8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TIMM13Q9Y5L4 95 aaPredicted RBP8.12□□□□□ -1.11
LINC00641-202ENST00000555688 TDRD15B5MCY1 1934 aaKnown RBP8.11□□□□□ -1.11
LINC00641-202ENST00000555688 A0A1W2PQ45 241 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms