RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 STX10O60499 249 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
TDP1-212ENST00000555565 PTPRNQ16849 979 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 C10orf120Q5SQS8 335 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 C10orf76Q5T2E6 689 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 TCERG1LQ5VWI1 586 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 PCSK4Q6UW60 755 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 Q6ZNB5 142 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 TRMT11Q7Z4G4 463 aaKnown RBP11.35□□□□□ -0.59
TDP1-212ENST00000555565 ZNF276Q8N554 614 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 TTC39CQ8N584 583 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 ERLEC1Q96DZ1 483 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 TMEM176AQ96HP8 235 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 BBS2Q9BXC9 721 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 DNAI2Q9GZS0 605 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 GAREM1Q9H706 876 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 TM7SF3Q9NS93 570 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 MARK1Q9P0L2 795 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 DNMT3LQ9UJW3 386 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 NAGPAQ9UK23 515 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 LSM7Q9UK45 103 aaKnown RBP11.35□□□□□ -0.59
TDP1-212ENST00000555565 BTBD3Q9Y2F9 522 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 COQ4Q9Y3A0 265 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 NFE2L3Q9Y4A8 694 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 RAD54BQ9Y620 910 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 SHROOM3Q8TF72 1996 aa11.35□□□□□ -0.59
TDP1-212ENST00000555565 A0A1B0GTW7 788 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 TRIM49BA6NDI0 452 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 PRRT4C9JH25 899 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 NEDD8-MDP1E9PL57 170 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 CACNG3O60359 315 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 STC2O76061 302 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 SMC2O95347 1197 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 TYRP14679 529 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 GNSP15586 552 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 PSEN1P49768 467 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 NUCB2P80303 420 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 GOLGA8FQ08AF8 430 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 GOLGA8DPQ0D2H9 430 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 HLA-BQ31612 363 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 PREPLQ4J6C6 727 aaPredicted RBP11.34□□□□□ -0.59
TDP1-212ENST00000555565 DCAF17Q5H9S7 520 aaPredicted RBP11.34□□□□□ -0.59
TDP1-212ENST00000555565 RAB41Q5JT25 222 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 WDR45BQ5MNZ6 344 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 SYCP2LQ5T4T6 812 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 ARHGAP17Q68EM7 881 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 GRAMD4Q6IC98 578 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 TPGS1Q6ZTW0 290 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
TDP1-212ENST00000555565 PIGZQ86VD9 579 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
TDP1-212ENST00000555565 LSM14AQ8ND56 463 aaKnown RBP11.34□□□□□ -0.59
TDP1-212ENST00000555565 PIP4K2CQ8TBX8 421 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 RHBDD1Q8TEB9 315 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 FOXJ1Q92949 421 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 SMARCE1Q969G3 411 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 SLC35C1Q96A29 364 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 P2RY11Q96G91 374 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 TSG101Q99816 390 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 UBXN6Q9BZV1 441 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 PRDM16Q9HAZ2 1276 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 DNAJC17Q9NVM6 304 aaKnown RBP11.34□□□□□ -0.59
TDP1-212ENST00000555565 WSB2Q9NYS7 404 aaPredicted RBP11.34□□□□□ -0.59
TDP1-212ENST00000555565 CLIC5Q9NZA1 410 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 PCDHGB2Q9Y5G2 931 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 SLCO1B1Q9Y6L6 691 aa11.34□□□□□ -0.59
TDP1-212ENST00000555565 GOLGA4Q13439 2230 aaKnown RBP11.33□□□□□ -0.59
TDP1-212ENST00000555565 KCNJ18B7U540 433 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 WASH3PC4AMC7 463 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 NDUFS2O75306 463 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 KLKB1P03952 638 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 CISD3P0C7P0 127 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 RALAP11233 206 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 CD6P30203 668 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 EIF2S3P41091 472 aaKnown RBP11.33□□□□□ -0.6
TDP1-212ENST00000555565 ABCG1P45844 678 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 CUL2Q13617 745 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 BECN1Q14457 450 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 NUDT18Q6ZVK8 323 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 ZNF605Q86T29 641 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 GALNT15Q8N3T1 639 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 ZCCHC9Q8N567 271 aaKnown RBP11.33□□□□□ -0.6
TDP1-212ENST00000555565 ANKRD52Q8NB46 1076 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 BHMTQ93088 406 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 TOE1Q96GM8 510 aaKnown RBP11.33□□□□□ -0.6
TDP1-212ENST00000555565 TIGD1Q96MW7 591 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 XPO6Q96QU8 1125 aaKnown RBP11.33□□□□□ -0.6
TDP1-212ENST00000555565 CDC6Q99741 560 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 ITM2CQ9NQX7 267 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 USP36Q9P275 1121 aaKnown RBP11.33□□□□□ -0.6
TDP1-212ENST00000555565 WDR35Q9P2L0 1181 aa11.33□□□□□ -0.6
TDP1-212ENST00000555565 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
TDP1-212ENST00000555565 KNL1Q8NG31 2342 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 TULP2O00295 520 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 FLRT2O43155 660 aa11.32□□□□□ -0.6
TDP1-212ENST00000555565 TLX3O43711 291 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms