RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 HEMGNQ9BXL5 484 aa18.3■□□□□ 0.52
PSEN1-212ENST00000555254 CALN1Q9BXU9 219 aa18.3■□□□□ 0.52
PSEN1-212ENST00000555254 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.3■□□□□ 0.52
PSEN1-212ENST00000555254 CLIC5Q9NZA1 410 aa18.3■□□□□ 0.52
PSEN1-212ENST00000555254 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.3■□□□□ 0.52
PSEN1-212ENST00000555254 EFR3BQ9Y2G0 817 aa18.3■□□□□ 0.52
PSEN1-212ENST00000555254 YIPF1Q9Y548 306 aa18.3■□□□□ 0.52
PSEN1-212ENST00000555254 V9GYY5 206 aaPredicted RBP18.3■□□□□ 0.52
PSEN1-212ENST00000555254 CLUHO75153 1309 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 C2CD4DB7Z1M9 353 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 MDM4O15151 490 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 TUBBP07437 444 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 PTPN2P17706 415 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 TFE3P19532 575 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 FSHRP23945 695 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 GBP2P32456 591 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 TFDP2Q14188 446 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 ERCC6LQ2NKX8 1250 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 GET4Q7L5D6 327 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 FAM131BQ86XD5 332 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 RFX6Q8HWS3 928 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 ELMOD1Q8N336 334 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 GPR161Q8N6U8 529 aaKnown RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 TDRD5Q8NAT2 981 aaKnown RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 DQX1Q8TE96 717 aaKnown RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 OVCA2Q8WZ82 227 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 MAGOHBQ96A72 148 aaKnown RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 ACSF2Q96CM8 615 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 ZNF512Q96ME7 567 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 PEBP4Q96S96 227 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 KRT12Q99456 494 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 CORO1BQ9BR76 489 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 SNRNP25Q9BV90 132 aaKnown RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 TTLL2Q9BWV7 592 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 DHX35Q9H5Z1 703 aaKnown RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 DNMT3BQ9UBC3 853 aaKnown RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 UXTQ9UBK9 157 aaPredicted RBP18.29■□□□□ 0.52
PSEN1-212ENST00000555254 ASB3Q9Y575 518 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 WDFY4Q6ZS81 3184 aa18.29■□□□□ 0.52
PSEN1-212ENST00000555254 FAM92AA1XBS5 289 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 RHOXF2BP0C7M4 288 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 RARGP13631 454 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 CDKN2BP42772 138 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 PPP3CCP48454 512 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 USP46P62068 366 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 MTMR3Q13615 1198 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 LLGL1Q15334 1064 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 PABPC1LQ4VXU2 614 aaKnown RBP18.28■□□□□ 0.52
PSEN1-212ENST00000555254 C8orf74Q6P047 294 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 OTOP3Q7RTS5 596 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 MAATS1Q7Z4T9 603 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 RNF135Q8IUD6 432 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 TTC13Q8NBP0 860 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 NOA1Q8NC60 698 aaKnown RBP18.28■□□□□ 0.52
PSEN1-212ENST00000555254 STKLD1Q8NE28 680 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 ADAM32Q8TC27 787 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 SERPINB11Q96P15 392 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 RHOXF2Q9BQY4 288 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 SLITRK6Q9H5Y7 841 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 WDCPQ9H6R7 721 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 TRPM5Q9NZQ8 1165 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 LIMD1Q9UGP4 676 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 FEZ2Q9UHY8 353 aaPredicted RBP18.28■□□□□ 0.52
PSEN1-212ENST00000555254 FZD10Q9ULW2 581 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 AP4E1Q9UPM8 1137 aa18.28■□□□□ 0.52
PSEN1-212ENST00000555254 hCG_1818297A0A087WSY0 165 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 GPR37L1O60883 481 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 PHF2O75151 1096 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 PAPLNO95428 1278 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 SLC2A3P11169 496 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 ATF6P18850 670 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 MCM3P25205 808 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 CHRNA3P32297 505 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 ADRA1BP35368 520 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 ARL4AP40617 200 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 CXCR3P49682 368 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 RAB6CQ53S08 254 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 BRMS1LQ5PSV4 323 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 MSANTD2Q6P1R3 559 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 TAC4Q86UU9 113 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 VSIG1Q86XK7 387 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 HS6ST3Q8IZP7 471 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 NTAN1Q96AB6 310 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 RAB6CQ9H0N0 254 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 SMOC2Q9H3U7 446 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 PRDM16Q9HAZ2 1276 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 NMUR1Q9HB89 426 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 PIGVQ9NUD9 493 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 GPATCH2LQ9NWQ4 482 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 SLC12A6Q9UHW9 1150 aa18.27■□□□□ 0.52
PSEN1-212ENST00000555254 ZNF487B1APH4 448 aa18.26■□□□□ 0.51
PSEN1-212ENST00000555254 H3BRJ5 948 aa18.26■□□□□ 0.51
PSEN1-212ENST00000555254 DYNC1I1O14576 645 aa18.26■□□□□ 0.51
PSEN1-212ENST00000555254 RHOP08100 348 aa18.26■□□□□ 0.51
PSEN1-212ENST00000555254 POU2F2P09086 479 aa18.26■□□□□ 0.51
PSEN1-212ENST00000555254 MYL4P12829 197 aa18.26■□□□□ 0.51
PSEN1-212ENST00000555254 KRT10P13645 584 aa18.26■□□□□ 0.51
PSEN1-212ENST00000555254 ZFXP17010 805 aaPredicted RBP18.26■□□□□ 0.51
PSEN1-212ENST00000555254 KPNA1P52294 538 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms