RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 ENGASEQ8NFI3 743 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 OR2T3Q8NH03 318 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 WFIKKN2Q8TEU8 576 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 SNX19Q92543 992 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 CCDC34Q96HJ3 373 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 FBRSQ9HAH7 460 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 CISHQ9NSE2 258 aa16.2■□□□□ 0.18
NEDD1-207ENST00000555114 KIAA1522Q9P206 1035 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-207ENST00000555114 ASPMQ8IZT6 3477 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 ATRXP46100 2492 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 CBFA2T3O75081 653 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 ZBED1O96006 694 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 PRKCHP24723 683 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 AFF3P51826 1226 aaKnown RBP16.19■□□□□ 0.18
NEDD1-207ENST00000555114 TKTL1P51854 596 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 COPAP53621 1224 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 PDE4CQ08493 712 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 HLA-BQ31612 363 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 FNDC3BQ53EP0 1204 aaKnown RBP16.19■□□□□ 0.18
NEDD1-207ENST00000555114 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
NEDD1-207ENST00000555114 CACUL1Q86Y37 369 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 FAM217AQ8IXS0 508 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 PNPLA1Q8N8W4 532 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
NEDD1-207ENST00000555114 ARID3AQ99856 593 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 LHX5Q9H2C1 402 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 LRRC4Q9HBW1 653 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 RAB20Q9NX57 234 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 HESX1Q9UBX0 185 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 EIF2B4Q9UI10 523 aaKnown RBP16.19■□□□□ 0.18
NEDD1-207ENST00000555114 HBS1LQ9Y450 684 aaKnown RBP16.19■□□□□ 0.18
NEDD1-207ENST00000555114 PCDHGB2Q9Y5G2 931 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 PKD1L2Q7Z442 2459 aa16.19■□□□□ 0.18
NEDD1-207ENST00000555114 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
NEDD1-207ENST00000555114 BCAT1P54687 386 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 RAD23BP54727 409 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 YWHAEP62258 255 aaKnown RBP16.18■□□□□ 0.18
NEDD1-207ENST00000555114 TRIP4Q15650 581 aaPredicted RBP16.18■□□□□ 0.18
NEDD1-207ENST00000555114 EDRF1Q3B7T1 1238 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 FAM124AQ86V42 546 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 FMNL3Q8IVF7 1028 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 RHBDD1Q8TEB9 315 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 P2RY11Q96G91 374 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 MAPK8IP1Q9UQF2 711 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 HPSEQ9Y251 543 aa16.18■□□□□ 0.18
NEDD1-207ENST00000555114 TAF4O00268 1085 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 XPO1O14980 1071 aaKnown RBP16.17■□□□□ 0.18
NEDD1-207ENST00000555114 LATS1O95835 1130 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 ATP5BP06576 529 aaKnown RBP16.17■□□□□ 0.18
NEDD1-207ENST00000555114 KRT85P78386 507 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 CAMK2GQ13555 558 aaPredicted RBP16.17■□□□□ 0.18
NEDD1-207ENST00000555114 GOLGA7BQ2TAP0 167 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 TTC31Q49AM3 519 aaPredicted RBP16.17■□□□□ 0.18
NEDD1-207ENST00000555114 PM20D1Q6GTS8 502 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 AHI1Q8N157 1196 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 SIX6OS1Q8N1H7 587 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 ZNF557Q8N988 423 aaPredicted RBP16.17■□□□□ 0.18
NEDD1-207ENST00000555114 SORCS1Q8WY21 1168 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 GOLGA1Q92805 767 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 TMA16Q96EY4 203 aaKnown RBP16.17■□□□□ 0.18
NEDD1-207ENST00000555114 ULBP1Q9BZM6 244 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 BTBD1Q9H0C5 482 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 IL21RQ9HBE5 538 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 CLEC4EQ9ULY5 219 aa16.17■□□□□ 0.18
NEDD1-207ENST00000555114 FNDC3AQ9Y2H6 1198 aaKnown RBP16.17■□□□□ 0.18
NEDD1-207ENST00000555114 A0A1B0GVT2 93 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 CETN3O15182 167 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 DNTTP04053 509 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 CAPNS1P04632 268 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 HLA-EP13747 358 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 HOXB3P14651 431 aaPredicted RBP16.16■□□□□ 0.18
NEDD1-207ENST00000555114 HOXD9P28356 352 aaPredicted RBP16.16■□□□□ 0.18
NEDD1-207ENST00000555114 BST2Q10589 180 aaKnown RBP16.16■□□□□ 0.18
NEDD1-207ENST00000555114 DPYDQ12882 1025 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 INAVAQ3KP66 663 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 SGO2Q562F6 1265 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 TMEM215Q68D42 235 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 CHST9Q7L1S5 443 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 GALNT15Q8N3T1 639 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 RBBP8NLQ8NC74 664 aaPredicted RBP16.16■□□□□ 0.18
NEDD1-207ENST00000555114 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 OSGEPQ9NPF4 335 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 ABCC13Q9NSE7 274 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 TSPAN16Q9UKR8 245 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 GPSM3Q9Y4H4 160 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 ZFYVE26Q68DK2 2539 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 AKAP13Q12802 2813 aa16.16■□□□□ 0.18
NEDD1-207ENST00000555114 ZZEF1O43149 2961 aa16.15■□□□□ 0.18
NEDD1-207ENST00000555114 TSPAN3O60637 253 aa16.15■□□□□ 0.18
NEDD1-207ENST00000555114 SEMA4FO95754 770 aa16.15■□□□□ 0.18
NEDD1-207ENST00000555114 PRR29P0C7W0 189 aa16.15■□□□□ 0.18
NEDD1-207ENST00000555114 HLA-FP30511 346 aa16.15■□□□□ 0.18
NEDD1-207ENST00000555114 GRIA4P48058 902 aa16.15■□□□□ 0.18
NEDD1-207ENST00000555114 CSNK1EP49674 416 aaKnown RBP16.15■□□□□ 0.18
NEDD1-207ENST00000555114 SFSWAPQ12872 951 aaKnown RBP16.15■□□□□ 0.18
NEDD1-207ENST00000555114 PKP1Q13835 747 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms