RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CTGFP29279 349 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 CCDC14Q49A88 953 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 DUPD1Q68J44 220 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 HSFY1Q96LI6 401 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 ZNF512Q96ME7 567 aaPredicted RBP17.1■□□□□ 0.33
PCNX1-209ENST00000554879 DUSP16Q9BY84 665 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 PCYOX1Q9UHG3 505 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 DSEQ9UL01 958 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 RASA4BC9J798 803 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 LSM1O15116 133 aaKnown RBP17.1■□□□□ 0.33
PCNX1-209ENST00000554879 MAP3K7O43318 606 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 RASA4O43374 803 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 PTK7Q13308 1070 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 BLMHQ13867 455 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 PDK2Q15119 407 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
PCNX1-209ENST00000554879 CFAP61Q8NHU2 1237 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 CCDC110Q8TBZ0 833 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 LRRC19Q9H756 370 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 PREBQ9HCU5 417 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 DMAP1Q9NPF5 467 aaPredicted RBP17.1■□□□□ 0.33
PCNX1-209ENST00000554879 LRRC8DQ7L1W4 858 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 TMEM110Q86TL2 294 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 PCED1BQ96HM7 432 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 ZNF570Q96NI8 536 aa17.1■□□□□ 0.33
PCNX1-209ENST00000554879 LTFP02788 710 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 GSTT1P30711 240 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 RPL9P32969 192 aaKnown RBP17.09■□□□□ 0.33
PCNX1-209ENST00000554879 LRRC38Q5VT99 294 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 OSTM1Q86WC4 334 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 MIOSQ9NXC5 875 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 LZTS1Q9Y250 596 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 WDR91A4D1P6 747 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
PCNX1-209ENST00000554879 IL1R2P27930 398 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 HSPA9P38646 679 aaKnown RBP17.09■□□□□ 0.33
PCNX1-209ENST00000554879 LPIN1Q14693 890 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 PPM1NQ8N819 430 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.33
PCNX1-209ENST00000554879 TRIM33Q9UPN9 1127 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 NAALADL1Q9UQQ1 740 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 LIASO43766 372 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 C10orf120Q5SQS8 335 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 ZDHHC17Q8IUH5 632 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 TMCO5AQ8N6Q1 288 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 POPDC2Q9HBU9 364 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 ABCF3Q9NUQ8 709 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 KANSL3Q9P2N6 904 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 STOML1Q9UBI4 398 aa17.09■□□□□ 0.33
PCNX1-209ENST00000554879 PDCD7Q8N8D1 485 aaKnown RBP17.08■□□□□ 0.33
PCNX1-209ENST00000554879 WNT8BQ93098 351 aa17.08■□□□□ 0.33
PCNX1-209ENST00000554879 HIPK3Q9H422 1215 aa17.08■□□□□ 0.33
PCNX1-209ENST00000554879 CNOT10Q9H9A5 744 aaKnown RBP17.08■□□□□ 0.33
PCNX1-209ENST00000554879 FGFR1OP2Q9NVK5 253 aa17.08■□□□□ 0.33
PCNX1-209ENST00000554879 PIH1D1Q9NWS0 290 aaKnown RBP17.08■□□□□ 0.33
PCNX1-209ENST00000554879 WHRNQ9P202 907 aa17.08■□□□□ 0.33
PCNX1-209ENST00000554879 CDH9Q9ULB4 789 aa17.08■□□□□ 0.33
PCNX1-209ENST00000554879 MOXD2PA6NHM9 499 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 CACNA2D1P54289 1103 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 LRRC36Q1X8D7 754 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 AGMOQ6ZNB7 445 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 B3GALT6Q96L58 329 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 SLC27A5Q9Y2P5 690 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 TCP11X1B4DZS4 312 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 SLC4A1P02730 911 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 CKBP12277 381 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 CA4P22748 312 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 EFEMP1Q12805 493 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 CCDC117Q8IWD4 279 aaPredicted RBP17.08■□□□□ 0.32
PCNX1-209ENST00000554879 STKLD1Q8NE28 680 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 TMEM169Q96HH4 297 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 CELF6Q96J87 481 aaKnown RBP17.08■□□□□ 0.32
PCNX1-209ENST00000554879 SPATA17Q96L03 361 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 TMEM106CQ9BVX2 250 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 UNC93B1Q9H1C4 597 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 PAPPA2Q9BXP8 1791 aa17.08■□□□□ 0.32
PCNX1-209ENST00000554879 A0A1W2PQ45 241 aaPredicted RBP17.07■□□□□ 0.32
PCNX1-209ENST00000554879 A0A1W2PQY0 241 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 HAS3O00219 553 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 TMCC1O94876 653 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 APOEP02649 317 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 RARGP13631 454 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 KCNE1P15382 129 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 SELPP16109 830 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
PCNX1-209ENST00000554879 DDR2Q16832 855 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 TRMT10CQ7L0Y3 403 aaKnown RBP17.07■□□□□ 0.32
PCNX1-209ENST00000554879 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
PCNX1-209ENST00000554879 SPAG7O75391 227 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 PIAS1O75925 651 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 RBL1P28749 1068 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 C3orf62Q6ZUJ4 267 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 FBXO32Q969P5 355 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 PTGESO14684 152 aa17.07■□□□□ 0.32
PCNX1-209ENST00000554879 XPO1O14980 1071 aaKnown RBP17.07■□□□□ 0.32
PCNX1-209ENST00000554879 FBXO21O94952 628 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms