RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 TUFMP49411 452 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 NSUN2Q08J23 767 aaKnown RBP eCLIP16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 SGSM3Q96HU1 749 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 SNX27Q96L92 541 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 TBCBQ99426 244 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 FAM129AQ9BZQ8 928 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 MAF1Q9H063 256 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 C11orf49Q9H6J7 331 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 ACTR5Q9H9F9 607 aaPredicted RBP16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 CTNNAL1Q9UBT7 734 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 ADAM28Q9UKQ2 775 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 SNRPAP09012 282 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 TKTP29401 623 aaKnown RBP16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 AARSP49588 968 aaKnown RBP eCLIP16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 ARFIP2P53365 341 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 LRRC43Q8N309 656 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 FBXO44Q9H4M3 255 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 LRRC19Q9H756 370 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 POPDC2Q9HBU9 364 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 NPHS2Q9NP85 383 aa16.66■□□□□ 0.26
PPP4R3A-205ENST00000554684 OR1E1P30953 314 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 RPL9P32969 192 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 CSE1LP55060 971 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 FUT10Q6P4F1 479 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 ECHDC2Q86YB7 292 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 C20orf96Q9NUD7 363 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 COL2A1P02458 1487 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 HSPA1AP0DMV8 641 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 HSPA1BP0DMV9 641 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 SCNN1BP51168 640 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 PTK6Q13882 451 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 RASGEF1CQ8N431 466 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 PDCD7Q8N8D1 485 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 BLOC1S5Q8TDH9 187 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 PCED1BQ96HM7 432 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 CDH9Q9ULB4 789 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 LIASO43766 372 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 FBXO21O94952 628 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 POLBP06746 335 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 CLTBP09497 229 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 MORN1Q5T089 497 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 RAP1GAP2Q684P5 730 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 ZC3H3Q8IXZ2 948 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 LGI2Q8N0V4 545 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 PAFAH2Q99487 392 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 XAB2Q9HCS7 855 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 TXLNGQ9NUQ3 528 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 SHOC2Q9UQ13 582 aa16.65■□□□□ 0.26
PPP4R3A-205ENST00000554684 ADCY6O43306 1168 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 CHKAP35790 457 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 TAF10Q12962 218 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 CCDC142Q17RM4 750 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 COLGALT1Q8NBJ5 622 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 SLC4A11Q8NBS3 891 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 ETNK1Q9HBU6 452 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 NT5MQ9NPB1 228 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 DYRK4Q9NR20 520 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 TBC1D13Q9NVG8 400 aa16.64■□□□□ 0.26
PPP4R3A-205ENST00000554684 MYH8P13535 1937 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 SMAPO00193 183 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 DIAPH2O60879 1101 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 FASTKD1Q53R41 847 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 LRRC38Q5VT99 294 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 ANKS3Q6ZW76 656 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.64■□□□□ 0.251e-8■■■■■ 28.8
PPP4R3A-205ENST00000554684 ZMAT2Q96NC0 199 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 FAM111AQ96PZ2 611 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 PAAF1Q9BRP4 392 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 NEUROG2Q9H2A3 272 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 SPG21Q9NZD8 308 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 TULP2O00295 520 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 DCTN3O75935 186 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 UNGP13051 313 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 TPH1P17752 444 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 NAA25Q14CX7 972 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 TTC27Q6P3X3 843 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 B3GNT9Q6UX72 402 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 ZDHHC17Q8IUH5 632 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 GBP7Q8N8V2 638 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 EMILIN2Q9BXX0 1053 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 FRMD8P1Q9BZ68 369 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 ZFP69BQ9UJL9 534 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 hCG_1818297A0A087WSY0 165 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 LRCH4O75427 683 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 IQCF3P0C7M6 154 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 BMPR2Q13873 1038 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 SNCBQ16143 134 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 MMEL1Q495T6 779 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 VARS2Q5ST30 1063 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 SRLQ86TD4 932 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 MAB21L3Q8N8X9 362 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 SCAMP5Q8TAC9 235 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 OR12D3Q9UGF7 316 aa16.64■□□□□ 0.25
PPP4R3A-205ENST00000554684 TLR5O60602 858 aa16.63■□□□□ 0.25
PPP4R3A-205ENST00000554684 BANF1O75531 89 aa16.63■□□□□ 0.25
PPP4R3A-205ENST00000554684 TM4SF4P48230 202 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms