RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SETSIPP0DME0 302 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 TKTP29401 623 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 BCAT1P54687 386 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 SNX16P57768 344 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 NT5DC4Q86YG4 428 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 TREML1Q86YW5 311 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 ANKRD52Q8NB46 1076 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 STKLD1Q8NE28 680 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 MCUQ8NE86 351 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 ADAM32Q8TC27 787 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 WDR60Q8WVS4 1066 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 KBTBD7Q8WVZ9 684 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 VTA1Q9NP79 307 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 FAM159BA6NKW6 160 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 ADCY6O43306 1168 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 KCNA4P22459 653 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 GTF2A2P52657 109 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 SNAPC2Q13487 334 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 HSF5Q4G112 596 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 PRAMEF19Q5SWL8 479 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 SLC26A9Q7LBE3 791 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 CRLF3Q8IUI8 442 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 AGAP3Q96P47 875 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 EBF4Q9BQW3 602 aa16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-203ENST00000554514 KPNA7A9QM74 516 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 PTPN9P43378 593 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 NDUFV1P49821 464 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 MXRA7P84157 204 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 ACSBG2Q5FVE4 666 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 NOTUMQ6P988 496 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 ADGRF2Q8IZF7 708 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 FBXO41Q8TF61 875 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 SLC10A4Q96EP9 437 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 FAM161BQ96MY7 647 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 PSAT1Q9Y617 370 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 RNF103O00237 685 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 PDHXO00330 501 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 DYNC1LI2O43237 492 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 USP12O75317 370 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 PAX7P23759 505 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 PSMB4P28070 264 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 UBAP2LQ14157 1087 aaKnown RBP16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 TEX9Q8N6V9 391 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 SMC1BQ8NDV3 1235 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 PGBD4Q96DM1 585 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 CLPTM1LQ96KA5 538 aa16.17■□□□□ 0.18
ARHGEF40-203ENST00000554514 COL1A2P08123 1366 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 KCNK1O00180 336 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 TPP1O14773 563 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 ZFXP17010 805 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 PGM1P36871 562 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 MAGEA3P43357 314 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 CCNA1P78396 465 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 STX3Q13277 289 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 MUM1Q2TAK8 710 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 FASTKD1Q53R41 847 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 PIGZQ86VD9 579 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 ZNF410Q86VK4 478 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 APPL2Q8NEU8 664 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 DNAJB3Q8WWF6 145 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 LRRC39Q96DD0 335 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 ADAMTS10Q9H324 1103 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 TLE6Q9H808 572 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 XAB2Q9HCS7 855 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 ARHGEF4Q9NR80 690 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 SUFUQ9UMX1 484 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 DNAJC6O75061 913 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 BEST1O76090 585 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 BPGMP07738 259 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 TPSB2P20231 275 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 IGFBP6P24592 240 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 MLH1P40692 756 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 MAGEA6P43360 314 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 SARNPP82979 210 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 PDE1BQ01064 536 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 SOX4Q06945 474 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 CRYMQ14894 314 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 TPSAB1Q15661 275 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 DGKDQ16760 1214 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 N4BP2L1Q5TBK1 243 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 CTU1Q7Z7A3 348 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 ZDHHC17Q8IUH5 632 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 USP6NLQ92738 828 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 P2RY11Q96G91 374 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 PLEKHA5Q9HAU0 1116 aa16.16■□□□□ 0.18
ARHGEF40-203ENST00000554514 A0A0A0MRY4 1105 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SMIM28A0A1B0GU29 152 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 MEI4A8MW99 385 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 ITM2AO43736 263 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 HNRNPCL1O60812 293 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 ERVK-10P10266 1014 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 CYP2C9P11712 490 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 ABL2P42684 1182 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 ABCG1P45844 678 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SLC8A3P57103 927 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 OCRLQ01968 901 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 SEMA5AQ13591 1074 aa16.15■□□□□ 0.18
ARHGEF40-203ENST00000554514 THOC5Q13769 683 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms