RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 ABCD1P33897 745 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 PNPLA4P41247 253 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 DGKGP49619 791 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 STK4Q13043 487 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 ALCAMQ13740 583 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 FAM26FQ5R3K3 315 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 CCDC183Q5T5S1 534 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 TMEM86AQ8N2M4 240 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 ERCC4Q92889 916 aaPredicted RBP17.79■□□□□ 0.44
NEK9-204ENST00000554258 SLITRK1Q96PX8 696 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 PSMG3-AS1Q96PY0 264 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 ARHGAP9Q9BRR9 750 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 FGFBP2Q9BYJ0 223 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 GTPBP4Q9BZE4 634 aaKnown RBP17.79■□□□□ 0.44
NEK9-204ENST00000554258 ASB7Q9H672 318 aa17.79■□□□□ 0.44
NEK9-204ENST00000554258 VILLO15195 856 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 HCRTO43612 131 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 BDNFP23560 247 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 LSSP48449 732 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 RIPPLY3P57055 190 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 E2F1Q01094 437 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 MORC3Q14149 939 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 COBLL1Q53SF7 1204 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 XKR5Q6UX68 686 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 ZNF507Q8TCN5 953 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 CCDC47Q96A33 483 aaKnown RBP17.78■□□□□ 0.44
NEK9-204ENST00000554258 HVCN1Q96D96 273 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 MRPL44Q9H9J2 332 aaKnown RBP17.78■□□□□ 0.44
NEK9-204ENST00000554258 POLR1BQ9H9Y6 1135 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 EXOC1Q9NV70 894 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 RMND1Q9NWS8 449 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 WDR35Q9P2L0 1181 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 MAN1B1Q9UKM7 699 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 PCDHB13Q9Y5F0 798 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 POLQO75417 2590 aa17.78■□□□□ 0.44
NEK9-204ENST00000554258 EIF3DO15371 548 aaKnown RBP eCLIP17.77■□□□□ 0.44
NEK9-204ENST00000554258 YKT6O15498 198 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 COCHO43405 550 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 SEMA4FO95754 770 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 IRF1P10914 325 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 CASP5P51878 434 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 COPAP53621 1224 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 BCAT1P54687 386 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 NOP14P78316 857 aaKnown RBP17.77■□□□□ 0.44
NEK9-204ENST00000554258 SHBQ15464 509 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 BMT2Q1RMZ1 405 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 TDRD10Q5VZ19 366 aaKnown RBP17.77■□□□□ 0.44
NEK9-204ENST00000554258 TPGS1Q6ZTW0 290 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 OSTM1Q86WC4 334 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 KIAA0895Q8NCT3 520 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 MYLPFQ96A32 169 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 SKA1Q96BD8 255 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 DUSP9Q99956 384 aaKnown RBP17.77■□□□□ 0.44
NEK9-204ENST00000554258 ASCL3Q9NQ33 180 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 TBC1D7Q9P0N9 293 aa17.77■□□□□ 0.44
NEK9-204ENST00000554258 PTPRJQ12913 1337 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 A0A0B4J269 797 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 NPC1O15118 1278 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 TSPAN3O60637 253 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 ATP2C2O75185 946 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 USP12O75317 370 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 PIGRP01833 764 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 BMP6P22004 513 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 HOXD13P35453 343 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 LHX1P48742 406 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 ACOT2P49753 483 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 CDH8P55286 799 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 IFRD2Q12894 506 aaPredicted RBP17.76■□□□□ 0.43
NEK9-204ENST00000554258 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
NEK9-204ENST00000554258 LINC00303Q3SY05 128 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 SGO2Q562F6 1265 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
NEK9-204ENST00000554258 FAM171BQ6P995 826 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 SLC39A2Q9NP94 309 aa17.76■□□□□ 0.43
NEK9-204ENST00000554258 CLEC18AA5D8T8 446 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 K7ENM7 598 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 GCNT3O95395 438 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 CISD3P0C7P0 127 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 ITGB6P18564 788 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 EPHA8P29322 1005 aaPredicted RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 ARRB1P49407 418 aaPredicted RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 RACK1P63244 317 aaKnown RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 CYP27A1Q02318 531 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 L1TD1Q5T7N2 865 aaKnown RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 HIST2H2BCQ6DN03 193 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 CLEC18BQ6UXF7 455 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 ADGRF2Q8IZF7 708 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 CLEC18CQ8NCF0 446 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 WBP2Q969T9 261 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 SYAP1Q96A49 352 aaPredicted RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 CCDC97Q96F63 343 aaPredicted RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 LHX5Q9H2C1 402 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 MARK1Q9P0L2 795 aa17.75■□□□□ 0.43
NEK9-204ENST00000554258 THAP10Q9P2Z0 257 aaPredicted RBP17.75■□□□□ 0.43
NEK9-204ENST00000554258 UBE4BO95155 1302 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 BLACEA4D250 179 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 F8VP50 259 aa17.74■□□□□ 0.43
NEK9-204ENST00000554258 ACP1P24666 158 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms